Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F19
         (1012 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    33   0.47 

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 33.5 bits (73), Expect = 0.47
 Identities = 27/124 (21%), Positives = 33/124 (26%)
 Frame = +3

Query: 405 PPXWXRXEX*XXPPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXP 584
           PP   R      PP  P    P          A        P PP+        P    P
Sbjct: 307 PPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPPVTTRRPTPPPTRPPP 366

Query: 585 PXXXXPXSXPTRQXPXSPDRXXTIXXSTXXSXXXPLQGSPXSEXQXAXPPXAXIPXEXSR 764
           P        PT   P +         +T  +   P   +P        PP   +P    R
Sbjct: 367 PPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRP---TPPPTKPPTRPPTTYLPPPTVR 423

Query: 765 TTXP 776
           TT P
Sbjct: 424 TTRP 427



 Score = 31.5 bits (68), Expect = 1.9
 Identities = 25/109 (22%), Positives = 31/109 (28%), Gaps = 6/109 (5%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXX---AQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSX 611
           PPPPP    P+      P     A        P PP+        P    PP    P   
Sbjct: 230 PPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRP 289

Query: 612 PTRQXPXS---PDRXXTIXXSTXXSXXXPLQGSPXSEXQXAXPPXAXIP 749
           PT + P +   P        +T      P   +P        PP    P
Sbjct: 290 PTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPP 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,648,688
Number of Sequences: 53049
Number of extensions: 329713
Number of successful extensions: 863
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5140279953
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)