Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F16
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.92 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.92 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.5  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 79  LTFNFITITYNHWMNIECLNLPV 147
           LT+N     Y +W+N+ CLNL +
Sbjct: 46  LTYNNTNRKY-YWLNVCCLNLSI 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 461 LLPSVD*VTAKFISQERKQENQ-HQNHCCIKLR*TRTALQLNSYCC 595
           ++P++D  T+ +     KQ  Q +QN C +K    R   + N+Y C
Sbjct: 467 VVPTLD-ATSYYAKDLEKQRQQCNQNKCPVKRGNGRCDEECNTYAC 511



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 578 LNSYCCLHSAGFSAGPCR 631
           +NSY C    GF+   C+
Sbjct: 42  INSYICTCKPGFTGSNCQ 59


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 335 YFAIRLYQNHGAADSIGNKTYDIATLITTH 246
           +F    Y N+ A   +  + ++IA    TH
Sbjct: 223 FFVSHKYTNYSAVQDLHRRGHEIAVFSLTH 252


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 335 YFAIRLYQNHGAADSIGNKTYDIATLITTH 246
           +F    Y N+ A   +  + ++IA    TH
Sbjct: 230 FFVSHKYTNYSAVQDLHRRGHEIAVFSLTH 259


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 335 YFAIRLYQNHGAADSIGNKTYDIATLITTH 246
           +F    Y N+ A   +  K ++IA    TH
Sbjct: 231 FFVSHKYTNYSAVQEMHRKGHEIAVHSITH 260


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 400 VCTLQPSELVQHIPHNGNDCTIILPSASIKIT 305
           +CT+  +  V+HI    N C+ I      K T
Sbjct: 316 ICTIMSAAAVEHILSIVNTCSQIPSEVEDKYT 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,679
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)