Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F12
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 92 5e-19
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 67 2e-11
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 28 7.3
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 28 7.3
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83226-2|CAB05723.1| 211|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 91.9 bits (218), Expect = 5e-19
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Frame = -2
Query: 601 KIQDEVKXDPDKATTVGGVFLYNITDNGKTVKQWTLDLKS--PVVHDGAPKSG-KADTTM 431
++ D VK DP T+ + LY ITD + ++TLD KS P V+ G K+G KA+ T+
Sbjct: 327 EMADGVKADPTAVKTLKSIVLYIITDGKNELGKFTLDFKSASPSVYLGDVKNGEKANATV 386
Query: 430 TIADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGPLLKSDAK 290
T+AD+D V IA+G LN Q A+M GKLK+ GN+ML QKL +L+ K
Sbjct: 387 TVADSDFVDIAAGKLNAQKAFMSGKLKVKGNVMLLQKLQTVLEKAKK 433
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = -2
Query: 601 KIQDEVKXDPDKATTVGGVFLYNITD-NGKTVKQWTLDLKSPVVHDGAPKSGKADTTMTI 425
+I++ + D + VG F I +GKT K WT+D KS + G S + + I
Sbjct: 11 EIKERIATDKEMVKKVGTSFRMTIAGADGKT-KVWTIDAKSDTPYVGDDSSRPVEIEINI 69
Query: 424 ADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGPLL 305
D+D + IA+G + P A+M+GK+K+ GNI A KL +L
Sbjct: 70 KDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKLRTIL 109
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 497 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 372
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 1203 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 1244
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 497 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 372
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 923 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 964
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical protein
C53B4.4c protein.
Length = 1304
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 497 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 372
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 923 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 964
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 497 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 372
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 1205 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 1246
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 497 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 372
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 1203 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 1244
>Z83226-2|CAB05723.1| 211|Caenorhabditis elegans Hypothetical
protein F43D2.3 protein.
Length = 211
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 565 ATTVGGVFLYNITDNGKTVKQWTLDLK 485
A T + ++ T NGKT+ Q T+D+K
Sbjct: 148 APTANKIVVFGTTPNGKTMIQMTIDMK 174
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 307 LKSDAKL*NYQFNYKEQFGCQGFCIGSFINFVI 209
+K++ + Y+FN + QFG C I F++
Sbjct: 369 IKANPSMDYYEFNCESQFGGMALCTNEGIRFIV 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,806
Number of Sequences: 27780
Number of extensions: 350035
Number of successful extensions: 748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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