Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F10
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 59 3e-09
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 59 3e-09
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 38 0.011
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 38 0.011
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 36 0.025
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 36 0.044
U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family... 35 0.059
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 32 0.55
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 32 0.55
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 32 0.55
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 31 0.72
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 31 0.72
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 31 0.96
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 30 1.7
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 30 1.7
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 3.9
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEGRIYDEILRVEATDKDCTPRYGDVCKYEILTD-RSQ 696
I V D N +AP Y V+EG++ +E+ ++A+DKDC G++C+YEI +
Sbjct: 130 IRVKDTNNHAPEIENPWYTFHVEEGKVVEEVGVLKASDKDCGHPNGEICEYEITNGLKEL 189
Query: 697 PFTINVEGVIR 729
PF IN GV+R
Sbjct: 190 PFAINNHGVLR 200
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEGRIYDEILRVEATDKDCTPRYGDVCKYEILTD-RSQ 696
I V D N +AP Y V+EG++ +E+ ++A+DKDC G++C+YEI +
Sbjct: 130 IRVKDTNNHAPEIENPWYTFHVEEGKVVEEVGVLKASDKDCGHPNGEICEYEITNGLKEL 189
Query: 697 PFTINVEGVIR 729
PF IN GV+R
Sbjct: 190 PFAINNHGVLR 200
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 442 RNDETTNSILPQLV--ATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEI 612
R D T S++ A+ P+ T + + + D+N+ +P F+ S+Y T+ E +
Sbjct: 744 REDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSF 803
Query: 613 LRVEATDKDCTP 648
L+V A D D P
Sbjct: 804 LQVSAIDADIGP 815
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 439 ARNDETTNSILPQLVATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEIL 615
A+N T I + A + + P I V D+N++AP + + T++E I +E+
Sbjct: 440 AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVG 499
Query: 616 RVEATDKDCTPRYGDVCKYEILTDRSQPFTINVE-GVIR 729
RV A D+D P + KY + + S+ F I+ + G+I+
Sbjct: 500 RVYAIDEDSGP--NGIIKYSM--EGSEDFIIDEDSGLIK 534
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKD 639
ITV DVN+ APVF+ +Y T+ E I I V+ATD+D
Sbjct: 363 ITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDED 403
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 VATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIY-DEILRVEATDKD 639
+ T + T + + + D+N+ AP F + Y T+ E +I+ ++A D D
Sbjct: 556 MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND 609
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 442 RNDETTNSILPQLV--ATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEI 612
R D T S++ A+ P+ T + + + D+N+ +P F+ S+Y T+ E +
Sbjct: 744 REDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSF 803
Query: 613 LRVEATDKDCTP 648
L+V A D D P
Sbjct: 804 LQVSAIDADIGP 815
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 439 ARNDETTNSILPQLVATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEIL 615
A+N T I + A + + P I V D+N++AP + + T++E I +E+
Sbjct: 440 AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVG 499
Query: 616 RVEATDKDCTPRYGDVCKYEILTDRSQPFTINVE-GVIR 729
RV A D+D P + KY + + S+ F I+ + G+I+
Sbjct: 500 RVYAIDEDSGP--NGIIKYSM--EGSEDFIIDEDSGLIK 534
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKD 639
ITV DVN+ APVF+ +Y T+ E I I V+ATD+D
Sbjct: 363 ITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDED 403
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 VATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIY-DEILRVEATDKD 639
+ T + T + + + D+N+ AP F + Y T+ E +I+ ++A D D
Sbjct: 556 MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND 609
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 442 RNDETTNSILPQLV--ATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEI 612
R D T S++ A+ P+ T + + + D+N+ +P F+ S+Y T+ E +
Sbjct: 744 REDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSF 803
Query: 613 LRVEATDKDCTP 648
L+V A D D P
Sbjct: 804 LQVSAIDADIGP 815
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 439 ARNDETTNSILPQLVATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEIL 615
A+N T I + A + + P I V D+N++AP + + T++E I +E+
Sbjct: 440 AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVG 499
Query: 616 RVEATDKDCTPRYGDVCKYEILTDRSQPFTINVE-GVIR 729
RV A D+D P + KY + + S+ F I+ + G+I+
Sbjct: 500 RVYAIDEDSGP--NGIIKYSM--EGSEDFIIDEDSGLIK 534
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKD 639
ITV DVN+ APVF+ +Y T+ E I I V+ATD+D
Sbjct: 363 ITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDED 403
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 VATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIY-DEILRVEATDKD 639
+ T + T + + + D+N+ AP F + Y T+ E +I+ ++A D D
Sbjct: 556 MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND 609
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +1
Query: 490 APIPTLSPFH---ITVTDVNEYAPVFSQSAY-VKTVDEGRIYDEILRVEATDKD 639
A IP+LS I V D+N+ P F S+Y +K + +I +I+R+ ATDKD
Sbjct: 1731 AGIPSLSATSKILIHVGDINDNTPEFELSSYFIKISENSKIGSKIIRILATDKD 1784
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 448 DETTNSILPQLVATAPIPTLSPFHITVTDVNEYAPVFSQSAY-VKTVDEGRIYDEILRVE 624
D + + + L+ T+P P++ I V DVN+ +P+F V+ + I +
Sbjct: 82 DRESENAIDMLIITSP-PSIIHILIDVLDVNDNSPIFPIDVQRVEIPETAPIGWRVQISG 140
Query: 625 ATDKDCTPRYGDVCKYEILTDRSQPFTINVEGVIR 729
ATD D + G + KYE++ + T++ G+++
Sbjct: 141 ATDPD-EGKNGTIGKYELVDSLATVDTMSPFGIVQ 174
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 35.5 bits (78), Expect = 0.044
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEGRIYDE-ILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I + DVN+ P+F + Y TV EG +E +L V A+D D + +G+V Y IL++ S
Sbjct: 629 IRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMD-SGTFGEV-SYHILSE-SS 685
Query: 697 PFTIN 711
F+IN
Sbjct: 686 SFSIN 690
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKD 639
I + D N+ APVFS+S Y +V I ++ V+ATD D
Sbjct: 221 IEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDAD 261
Score = 31.1 bits (67), Expect = 0.96
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +1
Query: 511 PFHITVTDVNEYAPVFSQSAYVKTVDEGRIYDE-ILRVEATDKDCTPRYGDVCKYEILTD 687
P I V V+E+APVF++S+Y + E + +++A D+D V KY I +D
Sbjct: 2427 PLKIVVEPVDEFAPVFTKSSYTLQIPISTPAGESVGQMQAIDED--GGVHGVVKYSI-SD 2483
Query: 688 RSQPFTINVE---GVIR 729
R T+ +E G+IR
Sbjct: 2484 RQS--TVKIEEHTGIIR 2498
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 502 TLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIY--DEILRVEATDKD 639
T + I V+D+N+ AP FS+ Y TV ++EA D D
Sbjct: 2011 TFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLD 2058
>U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family
protein 9 protein.
Length = 623
Score = 35.1 bits (77), Expect = 0.059
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 511 PFHITVTDVNEYAPVFSQSAY-VKTVDEGRIYDEILRVEATDKDCTPRYGDVCKYEILTD 687
P H+T+ DVN+ P F S Y K+ G + E + A D D R + + +
Sbjct: 224 PLHVTIVDVNDLLPRFKHSHYTAKSQKNGVLVFEPEAISAQDGD---RLNASLIFSLSGE 280
Query: 688 RSQPFTINVEGVIR 729
S+ F I+ +G IR
Sbjct: 281 LSEHFAIDNDGSIR 294
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEGRIYDEIL--RVEATDKD 639
+TV D+N+ APVF + Y + E I+ EATD D
Sbjct: 119 VTVKDINDNAPVFDSAEYFVDIKEELPTGTIVFTDFEATDND 160
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I + DVN+ P F++ Y V E + IL+V A DKD GD + D +
Sbjct: 630 IRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDT----GDNSRITYSVD-NH 684
Query: 697 PFTINVEGVI 726
F+IN G I
Sbjct: 685 NFSINSNGEI 694
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 487 TAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDE 591
T+ + + F + V DVN+ P F+ + T+DE
Sbjct: 1188 TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDE 1222
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDE-GRIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I VTD+N+ AP F ++ Y +V+E I ++ A D D + +V Y+ L++ S
Sbjct: 1649 IKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAK-DNVFTYQ-LSEESD 1706
Query: 697 PFTINVE 717
F + +
Sbjct: 1707 YFYVTTD 1713
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I + DVN+ P F++ Y V E + IL+V A DKD GD + D +
Sbjct: 630 IRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDT----GDNSRITYSVD-NH 684
Query: 697 PFTINVEGVI 726
F+IN G I
Sbjct: 685 NFSINSNGEI 694
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 487 TAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDE 591
T+ + + F + V DVN+ P F+ + T+DE
Sbjct: 1188 TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDE 1222
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDE-GRIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I VTD+N+ AP F ++ Y +V+E I ++ A D D + +V Y+ L++ S
Sbjct: 1649 IKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAK-DNVFTYQ-LSEESD 1706
Query: 697 PFTINVE 717
F + +
Sbjct: 1707 YFYVTTD 1713
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I + DVN+ P F++ Y V E + IL+V A DKD GD + D +
Sbjct: 630 IRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDT----GDNSRITYSVD-NH 684
Query: 697 PFTINVEGVI 726
F+IN G I
Sbjct: 685 NFSINSNGEI 694
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 487 TAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDE 591
T+ + + F + V DVN+ P F+ + T+DE
Sbjct: 1188 TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDE 1222
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDE-GRIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I VTD+N+ AP F ++ Y +V+E I ++ A D D + +V Y+ L++ S
Sbjct: 1649 IKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAK-DNVFTYQ-LSEESD 1706
Query: 697 PFTINVE 717
F + +
Sbjct: 1707 YFYVTTD 1713
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDEG-RIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I + DVN+ P F++ Y V E + IL+V A DKD GD + D +
Sbjct: 630 IRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDT----GDNSRITYSVD-NH 684
Query: 697 PFTINVEGVI 726
F+IN G I
Sbjct: 685 NFSINSNGEI 694
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 487 TAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDE 591
T+ + + F + V DVN+ P F+ + T+DE
Sbjct: 1188 TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDE 1222
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKTVDE-GRIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQ 696
I VTD+N+ AP F ++ Y +V+E I ++ A D D + +V Y+ L++ S
Sbjct: 1649 IKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAK-DNVFTYQ-LSEESD 1706
Query: 697 PFTINVE 717
F + +
Sbjct: 1707 YFYVTTD 1713
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = +2
Query: 290 PGRSDSSDPCPGTALFLPDTKQHT--------SWRGPF*DNGDRRKRSPPP 418
PG SDSS FLP +QH+ S GP+ G RSPPP
Sbjct: 1039 PGSSDSSFMSTSQPQFLPLNRQHSRSGHLMSNSANGPYSSGGSNGGRSPPP 1089
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = +2
Query: 290 PGRSDSSDPCPGTALFLPDTKQHT--------SWRGPF*DNGDRRKRSPPP 418
PG SDSS FLP +QH+ S GP+ G RSPPP
Sbjct: 1051 PGSSDSSFMSTSQPQFLPLNRQHSRSGHLMSNSANGPYSSGGSNGGRSPPP 1101
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKT-VDEGRIYDEILRVEATDKD 639
I + D N++APVFS +T + G+ D +++V+ATD+D
Sbjct: 480 IEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVKVDATDQD 520
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 VATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIYDEIL-RVEATDKD 639
V A + + + F + + D N+ +P F VDE D++L V A DKD
Sbjct: 1457 VQQANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKD 1510
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKT-VDEGRIYDEILRVEATDKD 639
I + D N++APVFS +T + G+ D +++V+ATD+D
Sbjct: 480 IEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVKVDATDQD 520
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 VATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIYDEIL-RVEATDKD 639
V A + + + F + + D N+ +P F VDE D++L V A DKD
Sbjct: 1457 VQQANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKD 1510
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 ITVTDVNEYAPVFSQSAYVKT-VDEGRIYDEILRVEATDKD 639
I + D N++APVFS +T + G+ D +++V+ATD+D
Sbjct: 480 IEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVKVDATDQD 520
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 VATAPIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIYDEIL-RVEATDKD 639
V A + + + F + + D N+ +P F VDE D++L V A DKD
Sbjct: 1457 VQQANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKD 1510
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 481 VATAPIPTLSPFHITV--TDVNEYAPVFSQSAYVKTVDEGRIYDEILRVEATDKD 639
V T P P IT+ D+N+ +P F Q Y+ ++++V ATD D
Sbjct: 80 VNTVPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVD 134
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 493 PIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIYDEILRVEATDKD 639
P+PT SP + APVF S +DE EI + AT D
Sbjct: 541 PVPTQSP---PLPTPKRLAPVFKPSQITVQIDENESQVEITKAHATYPD 586
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 481 VATAPIPTLSPFHITV--TDVNEYAPVFSQSAYVKTVDEGRIYDEILRVEATDKD 639
V T P P IT+ D+N+ +P F Q Y+ ++++V ATD D
Sbjct: 80 VNTVPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVD 134
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +1
Query: 451 ETTNSILPQLVATA-----PIPTLSPFHITVTDVNEYAPVFSQSAYVKTVDEGRIYDEIL 615
ET+ LP L T P+PT SP + APVF S +DE EI
Sbjct: 666 ETSQVELPSLPTTKMAPPQPVPTQSP---PLPTPKRLAPVFKPSQITVQIDENESQVEIT 722
Query: 616 RVEATDKD 639
+ AT D
Sbjct: 723 KAHATYPD 730
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 397 TKTKPASVSDTR*TARNDETTNSILPQLVATAPIPTLSPFHITVTDVNEYAPVFSQSAYV 576
TKT P+++ T TT +I + T + PF TVT A + + +
Sbjct: 177 TKTSPSTLR----TTTKPPTTTTIATTRITTKTTTSPPPFTTTVTTTTSAARTIATTTPI 232
Query: 577 KTVDEGRIYDEILR 618
KTV +++ + ++
Sbjct: 233 KTVPPVKVFGKAIK 246
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 347 YQEGTERSPGTDRRSHFDQGLVLLD-----QPMITLIGLVQLQIWDFFVVVSLGAVHRRQ 183
+Q+ +++PG RSH + G + + P+ ++I V L I ++ G + + Q
Sbjct: 1064 HQQNQQQAPGNRSRSHSNVGKMEQEAQRQGSPLDSIITSVPLSIEVHHHIMKPGPLEQGQ 1123
Query: 182 ENSDAQNAQEP 150
+ D+Q+ EP
Sbjct: 1124 SSVDSQSTAEP 1134
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 345 SGRNRAVPGHGSEESLRPGSRSP*SAHDNPHRARPTPDMGFLRCCFPRRR-TPPSGKLRR 169
S +NR HG+EE R RS SA + RA + R R+R PP R
Sbjct: 161 SKQNRTGTPHGAEELGREPDRSSRSARNEGPRAETGREK---RSSEDRKRQVPPEEPRRS 217
Query: 168 TKRSRTSQS 142
+ +S+T++S
Sbjct: 218 SHQSKTAKS 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,546,961
Number of Sequences: 27780
Number of extensions: 417624
Number of successful extensions: 1345
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -