Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F08
(829 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 35 0.091
02_05_1206 + 34941293-34941562,34942052-34942153,34942249-349425... 34 0.16
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 33 0.21
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 33 0.28
03_03_0130 - 14699658-14699723,14699828-14700109,14700444-147005... 32 0.64
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 31 1.5
06_01_0894 + 6853797-6853971,6855078-6855295,6856353-6856385,685... 30 2.0
12_02_1253 + 27349868-27349998,27350223-27350251,27350616-273506... 30 2.6
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 29 3.4
08_02_1212 - 25325911-25327047 29 4.5
08_02_0907 - 22485714-22486859,22487836-22487882,22488456-224888... 29 4.5
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 29 4.5
11_03_0181 - 11301759-11301838,11302294-11303095 29 6.0
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 6.0
01_06_1189 + 35241254-35241928 29 6.0
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569 28 7.9
06_03_0897 + 25762154-25763056,25764189-25764800 28 7.9
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 28 7.9
04_03_1022 - 21778315-21779007 28 7.9
02_03_0362 + 18158975-18159337 28 7.9
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 34.7 bits (76), Expect = 0.091
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -3
Query: 368 DNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERC 195
D+ S+VV + LP ++ + L + G+VK V L V FF+ RDA+R
Sbjct: 216 DDGASRGSLVVLNSLP-AMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRA 274
Query: 194 VKFFDGSKVDGQTIEVKY 141
+ +G ++ G+ + V+Y
Sbjct: 275 LHELNGKELFGRRLVVEY 292
>02_05_1206 +
34941293-34941562,34942052-34942153,34942249-34942521,
34942863-34942913
Length = 231
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -3
Query: 350 TSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFNVRDAERCV 192
T+ + F LP + D L+ +++ + V+VL G A V+ + D E+ +
Sbjct: 59 TTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVI 118
Query: 191 KFFDGSKVDGQTIEVKY 141
K DGS G+T+ V +
Sbjct: 119 KNLDGSLYSGRTMRVNF 135
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 251 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKY 141
L G V F N DAE+ + + DG ++DG ++V++
Sbjct: 175 LPRGYGYVEFKNRADAEKALLYLDGGQIDGNVVKVRF 211
>06_03_1455 +
30264023-30264174,30265930-30266070,30266328-30266430,
30266510-30266659,30267184-30267229,30267383-30267738
Length = 315
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 242 GRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVK 144
G A V+ V DAERC+K+ + S ++G+ I V+
Sbjct: 149 GFAFVTMDTVEDAERCIKYLNQSVMEGRNITVE 181
>03_03_0130 -
14699658-14699723,14699828-14700109,14700444-14700545,
14701038-14701385
Length = 265
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = -3
Query: 326 LPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKV 168
LP SVD L+ + G V+ V+V+ G V+ +V + E V+ F+G +
Sbjct: 93 LPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQFNGYIL 152
Query: 167 DGQTIEV 147
DG+++ V
Sbjct: 153 DGRSLRV 159
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -3
Query: 299 LSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKY 141
L N G V+FVD L V F + RDA DG K DG I V++
Sbjct: 34 LENLFSRYGRVRFVD-LKNEYGFVEFSDPRDANDARLDLDGRKYDGSDIIVQF 85
>06_01_0894 +
6853797-6853971,6855078-6855295,6856353-6856385,
6856776-6856856,6856857-6857069,6857184-6857381,
6857456-6857593,6858528-6858644,6858970-6859104
Length = 435
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 412 AGPPPPRSPYTHLNLTTPSNRPAWWS--LVIC-LRAWTSRPSATRCGRSAR*SSWMCWAW 242
A PPPP P+T L T S RP + + + C L A +RP R SS +C
Sbjct: 5 AAPPPP-PPFTAGRLPTTSRRPCFSAGRIFRCSLPAAAARPRNAAFLAPLRTSSAVCTKA 63
Query: 241 VGRSSAS-STCATPSVV 194
V S + T ++P VV
Sbjct: 64 VSNSDGTPGTSSSPHVV 80
>12_02_1253 +
27349868-27349998,27350223-27350251,27350616-27350658,
27351005-27351137,27351238-27351444,27351578-27351619
Length = 194
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 466 PRHSMVTTAGRRSTISETAGPPPPRSPYTHLNLTT--PSN 353
PR + A RST S TAG P P P+ H+ T PSN
Sbjct: 2 PRRAAAAAAAGRSTAS-TAGRPMPSPPHYHVGQGTKLPSN 40
>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 251 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKY 141
L G + F DAE+ + + DG ++DG +++++
Sbjct: 932 LPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLRF 968
>08_02_1212 - 25325911-25327047
Length = 378
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -1
Query: 463 RHSMVTTAGRRSTISETAGPPPPRSPYTHLNLTTPSNRPAWWSLVICLRAWTSRPSATRC 284
R + V+TAG T PP P PY + + P R + + A ++PS+
Sbjct: 308 RRAAVSTAGAPDTWRTPPAPPQPAQPYHYSSPVKPDRRGSGKDMAAAENA--TKPSSDEL 365
Query: 283 G 281
G
Sbjct: 366 G 366
>08_02_0907 -
22485714-22486859,22487836-22487882,22488456-22488830,
22489339-22489500,22490325-22490439
Length = 614
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 409 GPPPPRSPYTHLNLTTPSNRPAWWSL 332
GPPPP S + H+NL P++ P S+
Sbjct: 395 GPPPP-SMHNHINLLPPTSSPVTCSM 419
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 430 STISETAGPPPPRSPYTHLNLTTPSNRPAWWSLVICLRAWTS 305
+T + PPPPRS Y + L P R A + + + W S
Sbjct: 3 ATATACPAPPPPRSLYRGVALAAPGRRRA-GDIPVLIEFWAS 43
>11_03_0181 - 11301759-11301838,11302294-11303095
Length = 293
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 463 RHSMVTTAGRRSTISETAGPPPPRSPYTHLNLTTP 359
RH + T AG E P P SP+ H++ TP
Sbjct: 134 RHCLDTVAGLAGWFREDFPAPSPPSPFEHVHGVTP 168
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = -3
Query: 329 YLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSK 171
YLPP++D L + GE+ V+ G V + +V A + +G
Sbjct: 313 YLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYH 372
Query: 170 VDGQTIEVK 144
++G+ I V+
Sbjct: 373 LEGRVIAVR 381
>01_06_1189 + 35241254-35241928
Length = 224
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 418 ETAGPPPPRSPYTHLNLTTPSNRPAWWSLVI-CLRAWT 308
+T PPPP P T L+ T RP+ W L R+W+
Sbjct: 182 DTPAPPPPPRPNTELS-TRARARPSLWMLRFRGFRSWS 218
>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
Length = 134
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Frame = -3
Query: 332 SYLPPSVDLQALSNKMREVGEVKFVDV------LGMGRAIVSFFNVRDAERCVKFFDGSK 171
S L P V + + E+GE+K V G A V F DA +K +DG
Sbjct: 31 SNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVI 90
Query: 170 VDGQTIEV 147
+DG +++
Sbjct: 91 LDGNPMKI 98
>06_03_0897 + 25762154-25763056,25764189-25764800
Length = 504
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +3
Query: 342 HAGRLLGVVRFKCVYGLRGGGGPAVSLIVDRLPAVVTIECRGVFELLSLDDVPLRA 509
H L G ++ + + + GP V L + RLP VV E++ DV A
Sbjct: 54 HLHHLAGALQHRAMRDIARRHGPLVLLRLGRLPVVVASSADAAREVMRTSDVAFAA 109
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/87 (22%), Positives = 44/87 (50%)
Frame = -3
Query: 404 APSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVS 225
+PSA S+ A ++ + + + + LP S+ + N G++ V ++ + ++V
Sbjct: 496 SPSA-SISAVQTTQDINKSRLYITN-LPRSMTADKMVNLFAPFGQITKV-LMNLEYSLVW 552
Query: 224 FFNVRDAERCVKFFDGSKVDGQTIEVK 144
+ + A + V+ DG V+G+ + VK
Sbjct: 553 YADAPSATKAVQHMDGYMVEGKRLVVK 579
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 406 PPPPRSPYTHLNLTTPSNRPAWW 338
PPPP PY +L PS P W
Sbjct: 40 PPPPPPPYVPPHLLPPSPAPQQW 62
>02_03_0362 + 18158975-18159337
Length = 120
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 313 WTSRPSATRCGRSAR*SSWMCWAWVGRSSASSTCA 209
W +RP CG S R +C W S TCA
Sbjct: 40 WDARPRCATCGGSGR-VDCLCNRWSDGDSGCRTCA 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,139,744
Number of Sequences: 37544
Number of extensions: 463231
Number of successful extensions: 2035
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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