Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F06
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = +3

Query: 93  NGSFDTLKVKS*RSARIALLVQALGFARPVRGRELLHASLELGPEVTYESLHRP 254
           NG  +T   ++  +  ++L++      + +  REL+  S +   ++ YESL  P
Sbjct: 7   NGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTNP 60



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 282 RVPFDLFRN 308
           RVPFDLF N
Sbjct: 335 RVPFDLFEN 343


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
 Frame = -3

Query: 501 HGGHHCHGQ---VN*HREGDRSTHH 436
           H GHH H Q   VN H   + S  H
Sbjct: 325 HAGHHIHAQHHVVNHHVAANGSLKH 349


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 519 RADLPGHGGHHCH 481
           RAD PG+   HCH
Sbjct: 660 RADNPGYWLFHCH 672


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 398 CREGVSWMNKIIYRFV 351
           C E   W NK+I +F+
Sbjct: 177 CVENRKWQNKVIQKFL 192


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 398 CREGVSWMNKIIYRFV 351
           C E   W NK+I +F+
Sbjct: 410 CVENRKWQNKVIQKFL 425


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 398 CREGVSWMNKIIYRFV 351
           C E   W NK+I +F+
Sbjct: 410 CVENRKWQNKVIQKFL 425


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 478 SMTMMAAVPREVCAATRPSKSINTVSQTFLGMSGGRGASWYD 603
           S+T     P ++ A   PS+S N + Q    ++     S+Y+
Sbjct: 325 SLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTYPSYYN 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,927
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)