Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F05
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.19 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.58 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   7.1  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   7.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   7.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   7.1  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 631 PPKPVPSVDKRPPPITDDSPVRA 563
           PP+PVP+ + +P   T+  P +A
Sbjct: 392 PPEPVPTPEPQPTQTTESEPTQA 414


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -3

Query: 603 SALRQSRMILPYEPSLNGENCLNGGTGWWKYEFCYGKHVLQYHIDR 466
           ++LRQ   +L YE    G   +   T W  Y    GK V + HID+
Sbjct: 619 NSLRQYEDLLEYEAKEEGPKVVCYMTNWAFYRKAEGKFVPE-HIDQ 663


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 374 GFGAFPLLSLIQSKCAFSSNRP 439
           G   FPLL+LI  KC  ++  P
Sbjct: 82  GHPLFPLLALIFEKCELATCTP 103


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 700 KDGETHLKFELHPAGDDEDMTSDPP 626
           K  E H + EL  +  D D+T  PP
Sbjct: 38  KSPENHPETELSDSDCDLDVTGTPP 62


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 359 FQYRISIRTATFA 321
           F+YR  IRTA FA
Sbjct: 35  FEYREDIRTAKFA 47


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 359 FQYRISIRTATFA 321
           F+YR  IRTA FA
Sbjct: 35  FEYREDIRTAKFA 47


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 359 FQYRISIRTATFA 321
           F+YR  IRTA FA
Sbjct: 35  FEYREDIRTAKFA 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,536
Number of Sequences: 336
Number of extensions: 4282
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)