Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F05
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0916 - 25932934-25933090,25933170-25933276,25933356-259334... 68 1e-11
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 35 0.096
01_06_0146 + 26969011-26969995,26970878-26970930 34 0.13
11_06_0157 - 20754134-20755085,20755311-20755642 32 0.51
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 31 1.2
06_01_0020 + 212055-213440 30 2.1
02_05_1277 - 35408097-35409080 30 2.1
03_01_0037 - 335646-335855,336480-336686,336962-337129,337377-33... 29 3.6
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 29 3.6
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 29 4.7
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 29 4.7
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 4.7
09_02_0543 + 10427321-10428315,10428440-10429154 29 6.3
08_02_0083 + 12063349-12063406,12066151-12066480,12066529-120671... 29 6.3
07_03_0387 - 17536026-17536636,17536772-17537150 28 8.3
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 28 8.3
01_01_0215 - 1838452-1838685,1839125-1839240,1840200-1840734 28 8.3
>06_03_0916 -
25932934-25933090,25933170-25933276,25933356-25933422,
25933509-25933624,25933873-25933944,25934055-25934255,
25934652-25934728,25935131-25935230
Length = 298
Score = 67.7 bits (158), Expect = 1e-11
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = -3
Query: 612 ASTSALRQSRMILPYEPS----LNGENCLNGGTGWWKYEFCYGKHVLQYHIDRAGEKT-- 451
A+ + R + P +P + + C GWW YEFCY + Q H++ GEK
Sbjct: 96 ATNVIIESERRVKPKDPDELLEILKDQCFYRHEGWWSYEFCYYGKIRQVHVE--GEKVIQ 153
Query: 450 TVMLGRFDEKAHLDWIKDNKGKAPKPIDQRISIS-----HFYSNGDVCDKTGRPRQTEVK 286
+LG +D A + ++ + D I S H Y+NG VCD T PR+TEV+
Sbjct: 154 EYVLGEYDADATDAYYENQTSDSADEDDNLIDTSKRYHVHLYTNGTVCDLTDMPRETEVR 213
Query: 285 LKCLE 271
C E
Sbjct: 214 FVCSE 218
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 34.7 bits (76), Expect = 0.096
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 295 GLPGSAGFVANVAVRIEMRY*NSLIYRFRSFPFIILDPVQMRFLIKSTQHYGGLLAGAIY 474
G PG AN+ I + NS +Y FR+F +++ + M ++ + +G IY
Sbjct: 510 GAPGKELLKANIDREILLMKRNSFVYMFRTFQLMVVSLIAMTLFFRTKMKRDSVTSGGIY 569
Query: 475 V 477
+
Sbjct: 570 M 570
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 664 PAGDDEDMTSDPPKPVPSVDKRPPPITDDSP 572
PA D +D S PP P P PPPI+ +P
Sbjct: 12 PATDGDDAQSHPPPPTPHPATDPPPISPQNP 42
>11_06_0157 - 20754134-20755085,20755311-20755642
Length = 427
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = -2
Query: 757 DNADQTVXIYLQFESRKFEKDGETHLKFELHPAGD------DEDMTSDPPKPVPSVD 605
D DQT LQFE K+E D E + E AGD DED D +P P+ D
Sbjct: 255 DYVDQTDGDVLQFELDKYEDDLEHASEHENWRAGDGLKPESDEDEDEDDLEPEPNTD 311
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 31.1 bits (67), Expect = 1.2
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 358 NSLIYRFRSFPFIILDPVQMRFLIKSTQHYGGLLAGAIYV 477
N +YRFR+F +++ + M +++ H+ G +Y+
Sbjct: 569 NMFVYRFRAFQLLVITIIVMTLFLRTNMHHETRTDGIVYL 608
>06_01_0020 + 212055-213440
Length = 461
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 529 TTI*TIFPV*GRLVRENHP*LAEGACRRSV 618
TT+ T +PV GR V NHP EG C S+
Sbjct: 67 TTLNTYYPVAGRFVTHNHP-EPEGGCSVSI 95
>02_05_1277 - 35408097-35409080
Length = 327
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 703 EKDGETHLKFELH---PAGDDEDMTSDPPKPVPSV 608
+K+G T + EL PA DE+ S PP P P V
Sbjct: 264 KKEGSTSINLELDLNLPAPSDEESVSPPPPPPPPV 298
>03_01_0037 -
335646-335855,336480-336686,336962-337129,337377-337973
Length = 393
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 631 PPKPVPSVDKRPPPITDDSPVRAF 560
PP+P+PS+ ++PP T R F
Sbjct: 4 PPRPIPSIHRQPPKPTTTHVARCF 27
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 655 DDEDMTSDPPKPVPSVDKRPPPITDDSPVRAFLKRGKLSK 536
D +D+T+DP K P V K P ++ + R +KR K
Sbjct: 867 DAQDVTNDPKKKRPKVAKSSPKLSKPASERQEVKRTSAKK 906
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 643 MTSDPPKPVPSVDKRPPPITDDSPVRAFLKRGK 545
M PP P+ ++ PPP+ + SP A + R K
Sbjct: 117 MMMPPPPPIDTLPPPPPPLPEFSPSPAKIHRSK 149
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 649 EDMTSDPPKPVPSVDKRPPPITDDSPVRAFLKRGK 545
E++ + PP P P +R +D PV +FL+ K
Sbjct: 80 EEIRAPPPAPKPEALRRADSDDEDDPVESFLRAKK 114
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = -2
Query: 733 IYLQFESRKFEKDGETHLKFELHPAGDDEDM-TSDPPKPVPSVDKRPPPITDDSPVRAFL 557
+ L+FE+ + H++ +LHP +D TS V ++D P D + AF
Sbjct: 711 LLLEFETATDAAAAKAHIRRQLHPDVCSQDKNTSGHELFVRNIDNSVP---DMEFINAFS 767
Query: 556 KRGKLSKWWYRLVEIRVLLREARAP 482
+ G++ +W + ++ L+ + R+P
Sbjct: 768 RFGEVIRWQFNKLDGNCLI-DYRSP 791
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 646 DMTSDPPKPVPSVDKRPPPITDDSP 572
DM PP P P PPP D +P
Sbjct: 42 DMPPPPPTPAPQSSPAPPPAPDMTP 66
>08_02_0083 +
12063349-12063406,12066151-12066480,12066529-12067174,
12089873-12089933
Length = 364
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/85 (22%), Positives = 42/85 (49%)
Frame = -2
Query: 769 IKLMDNADQTVXIYLQFESRKFEKDGETHLKFELHPAGDDEDMTSDPPKPVPSVDKRPPP 590
++L NA+ + ++ + F HL+ E+H +E +PP P+ ++ PP
Sbjct: 54 LQLAYNAESKIEEDMKKQHAMFLSSITNHLQ-EVHNHEKEERDMKEPPVPLITLKVEAPP 112
Query: 589 ITDDSPVRAFLKRGKLSKWWYRLVE 515
++++ ++ L +++K LVE
Sbjct: 113 LSEEG-IKGKLNGAEINKAEQPLVE 136
>07_03_0387 - 17536026-17536636,17536772-17537150
Length = 329
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 673 ELHPAGDDEDMTSDPPKPVPSVDKRPPPITDDSPVRAFLKRGK 545
E+ P ++E+ DP + V + K+ PP+T PV F RG+
Sbjct: 247 EVEPMVEEEE---DPEERVMELVKQIPPLTQPPPVEHFGGRGR 286
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 570 TGESSVIGGGRLSTLGTGFGGSDVISSSSPAG 665
TG SS G G +S G GGS I S S G
Sbjct: 161 TGSSSGYGSGGVSYRSRGHGGSSSIGSGSGVG 192
>01_01_0215 - 1838452-1838685,1839125-1839240,1840200-1840734
Length = 294
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 552 RLRKARTGESSVIGGGRLSTLGTGFGGSDVISSSSPAGCSSN 677
RL G S GG S+ G G GG S+ SP CSSN
Sbjct: 68 RLSDGDRGGLSDDDGG--SSGGDGVGGGSASSACSPPACSSN 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,748,020
Number of Sequences: 37544
Number of extensions: 548264
Number of successful extensions: 2492
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2450
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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