Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F03
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 308 IS*CFKWLYQNMAQKNLLVFRSCNFLKL*YQGYLTLTILL 189
           I+ C  +   N    +LLVF + NF+ L    Y+TL I+L
Sbjct: 201 ITACRLFKIDNSLILDLLVFITINFVVLLGDLYVTLYIIL 240


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 217 WYYNLRKLQERNTNK 261
           WYY L  L   NTN+
Sbjct: 39  WYYLLTNLTYNNTNR 53


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 485 YLYSSGQLDICNPV*IQKYKTVKDDTTF 568
           +LY + +  +   V I+  KT  D+TTF
Sbjct: 425 WLYLNNEGSLVYNVQIENLKTTPDNTTF 452


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 139 ISRKCYIYYIVQIT 180
           I+  C +YYI+QIT
Sbjct: 164 INDMCSLYYILQIT 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,537
Number of Sequences: 336
Number of extensions: 3940
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)