Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F02
         (814 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2YTD2 Cluster: Putative uncharacterized protein; n=3; ...    37   0.53 
UniRef50_A1YIZ3 Cluster: Capsid-associated protein; n=1; Spodopt...    33   8.6  
UniRef50_Q1AWX4 Cluster: Peptidoglycan glycosyltransferase precu...    33   8.6  

>UniRef50_A2YTD2 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 309

 Score = 37.1 bits (82), Expect = 0.53
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +1

Query: 112 NYTSLKHVSTRT--AHTNATHKKEAKAQRGIVFIVLALALGRGLPGFGNTAVP 264
           NY   K  +++    H NA  ++ + A+RG      A A GRGL GFG+  VP
Sbjct: 114 NYCQRKFYTSQALGGHQNAHKRERSLAKRGAAVAAAAAAAGRGLYGFGDPFVP 166


>UniRef50_A1YIZ3 Cluster: Capsid-associated protein; n=1; Spodoptera
           frugiperda MNPV|Rep: Capsid-associated protein -
           Spodoptera frugiperda nuclear polyhedrosis virus (SfNPV)
          Length = 460

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +3

Query: 663 TQNPAESASNHTAQKNKREVXTXVPTSTSKMGSXAPXCPPQP 788
           T+  AE+ S+  A  NK  V T +P ST KMG+     PP P
Sbjct: 165 TKPSAETVSS--ALPNKAPVSTSIPQSTPKMGAEQSYAPPPP 204


>UniRef50_Q1AWX4 Cluster: Peptidoglycan glycosyltransferase
           precursor; n=1; Rubrobacter xylanophilus DSM 9941|Rep:
           Peptidoglycan glycosyltransferase precursor -
           Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
          Length = 687

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 115 YTSLKHVSTRTAHTNATHKKEAK--AQRGIVFIVLALALGRGLPGFGNTAVPD 267
           Y  +    T +    ATH KE K  AQRG+++      L   +PG   T +PD
Sbjct: 53  YLQILTGETLSLSARATHTKEVKIPAQRGVIYDRDGEVLASNVPGMNVTVIPD 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,144,104
Number of Sequences: 1657284
Number of extensions: 13901744
Number of successful extensions: 35195
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35173
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)