Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F01
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   6.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2

Query: 554 ESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEV 432
           E C T+AC    + C   I P AN    A     +VFMD +
Sbjct: 504 EECNTYACEFDGNDCSLGINPWANC--TASTRCWEVFMDGI 542


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 33  LFVNVLIQWPF*ILIWC 83
           LF+N+  +WP  +  WC
Sbjct: 101 LFLNLAKRWPKFVKDWC 117


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 33  LFVNVLIQWPF*ILIWC 83
           LF+N+  +WP  +  WC
Sbjct: 101 LFLNLAKRWPKFVKDWC 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,327
Number of Sequences: 336
Number of extensions: 4229
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)