Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F01
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical p...   116   1e-26
U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical p...   116   1e-26
U80446-4|AAB37804.1|  443|Caenorhabditis elegans Hypothetical pr...    32   0.39 

>U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical
           protein C17G10.9a protein.
          Length = 537

 Score =  116 bits (280), Expect = 1e-26
 Identities = 58/129 (44%), Positives = 79/129 (61%)
 Frame = -2

Query: 734 SSRSYQXDQINXQXEQMYHLLAICLVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEF 555
           S +++Q D I    +Q++HLLAICL + PQ +DESI   L E+   E+M  M  G++ EF
Sbjct: 323 SKKNFQYDVIGKTWDQLFHLLAICLAIQPQRIDESIASQLSER-CGERMMHMANGNIDEF 381

Query: 554 ESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTL 375
            + F   CPKFLS      E G N  ++ +  QTQ F++ +  Q  LP +R YLKLYTTL
Sbjct: 382 RNAFATGCPKFLSPTTVVYE-GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTL 440

Query: 374 PMAKLAAFM 348
           P  KLA+FM
Sbjct: 441 PTKKLASFM 449



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -3

Query: 241 GPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 68
           GPS  D   +  +++DFY+D DMI+IADTKVA   G+ FIR + K +E+   L  + I
Sbjct: 478 GPSSADDD-EPQTDIDFYVDRDMINIADTKVARHVGEHFIRHIQKLQEVQDVLKRLDI 534


>U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical
           protein C17G10.9b protein.
          Length = 535

 Score =  116 bits (280), Expect = 1e-26
 Identities = 58/129 (44%), Positives = 79/129 (61%)
 Frame = -2

Query: 734 SSRSYQXDQINXQXEQMYHLLAICLVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEF 555
           S +++Q D I    +Q++HLLAICL + PQ +DESI   L E+   E+M  M  G++ EF
Sbjct: 321 SKKNFQYDVIGKTWDQLFHLLAICLAIQPQRIDESIASQLSER-CGERMMHMANGNIDEF 379

Query: 554 ESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTL 375
            + F   CPKFLS      E G N  ++ +  QTQ F++ +  Q  LP +R YLKLYTTL
Sbjct: 380 RNAFATGCPKFLSPTTVVYE-GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTL 438

Query: 374 PMAKLAAFM 348
           P  KLA+FM
Sbjct: 439 PTKKLASFM 447



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -3

Query: 241 GPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 68
           GPS  D   +  +++DFY+D DMI+IADTKVA   G+ FIR + K +E+   L  + I
Sbjct: 476 GPSSADDD-EPQTDIDFYVDRDMINIADTKVARHVGEHFIRHIQKLQEVQDVLKRLDI 532


>U80446-4|AAB37804.1|  443|Caenorhabditis elegans Hypothetical
           protein F56A3.2 protein.
          Length = 443

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -3

Query: 529 PNSYRRVPRPLNPVPTMAVMLSNTRPKSLWTRSVNKKCFRPYVPI*NYTPPSR 371
           P     VP  +   P ++    +  PKS+  RSV+  CF P V   N  P ++
Sbjct: 56  PEDTDTVPLTIPSTPALSGKFDSKTPKSVRRRSVSMSCFTPIVETINQPPTNQ 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,863,982
Number of Sequences: 27780
Number of extensions: 404925
Number of successful extensions: 1028
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)