Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E24
(875 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 63 4e-11
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 52 1e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 47 3e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 45 2e-05
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 44 4e-05
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 43 7e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 43 7e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 1e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 39 0.001
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 36 0.006
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 34 0.023
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.22
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 30 0.38
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 29 0.87
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 28 1.5
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 1.5
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 2.7
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 2.7
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.5
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 4.6
SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 comple... 26 6.1
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 26 6.1
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 26 8.1
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 26 8.1
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 63.3 bits (147), Expect = 4e-11
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Frame = -2
Query: 736 DVNMFVCQV--CECNFETFGAIERHMNVHY--RNYIC--KECGTGFVTRARLKVHFGNTH 575
+V F C C+ F T +ERH+ VH + Y C + C F +L+ H H
Sbjct: 79 NVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Query: 574 VG-GAFPC--EMCGKMFVTQLRLKNHINSVHKMVKRFRC--NKC--SERFTEYVYRQKHL 416
+PC + C F T+ +L+NH+N H+ + + C C E F ++ Q H+
Sbjct: 139 THLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHI 198
Query: 415 EDVHGVPSIKYKCNVCEKSFSRRYNLSMH--MKRDHLEE-KNFQCEL 284
+ H VPS C++C + F +L H + + LEE K + C +
Sbjct: 199 REAH-VPS----CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPM 240
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -3
Query: 222 EKIYECSV--CKKSYARKKTLSEHMKIHNNDRRFAC--AVCGQAFVQKCSLKGHMKTH 61
+KI+ C C K Y+R L +H++ H+N+R F C C +AF +K LK H + H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCH 77
Score = 45.6 bits (103), Expect = 9e-06
Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Frame = -2
Query: 718 CQVCECNFETFGAIERHMNVHYRNYIC--KECGTGFVTRARLKVHFGNTH---VGGAFPC 554
C C + + + H Y C ++C F T+ +L+ H H + + P
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Query: 553 EMC--GKMFVTQLRLKNHINSVHKMVKRFRCNKCSERFTEYVYRQKH--LEDVHGVPSIK 386
E C + F +L+NHI H C+ C +F + + H L
Sbjct: 180 ESCVGHEGFEKWSQLQNHIREAHVP----SCSICGRQFKTAAHLRHHVVLHQTTLEERKT 235
Query: 385 YKCNV--CEKSFSRRYNLSMHMKRDHLEEKNFQCELCPYKCFSNKQLSMHM 239
Y C + C+KSF+R L H+ H F C+ C K L H+
Sbjct: 236 YHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
Score = 45.6 bits (103), Expect = 9e-06
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = -2
Query: 697 FETFGAIERHMN-VHYRNYICKECGTGFVTRARLK----VHFGNTHVGGAFPCEM--CGK 539
FE + ++ H+ H + C CG F T A L+ +H + C M C K
Sbjct: 188 FEKWSQLQNHIREAHVPS--CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKK 245
Query: 538 MFVTQLRLKNHINSVHKMVKRFRCNKCSERFTEYVYRQKHLE 413
F LK HI+ +H+ F C+ C +F Q+HLE
Sbjct: 246 SFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 219 KIYECSV--CKKSYARKKTLSEHMK-IHNNDRRFACAVCGQAFVQKCSLKGHMK 67
K Y C + CKKS+ R L +H+ IH + F C CG F K L+ H++
Sbjct: 234 KTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
Score = 33.1 bits (72), Expect = 0.053
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 198 CKKSYARKKTLSEHMKIHNNDRRFACAV--CGQAFVQKCSLKGHMKTH 61
C K++ RK L H + H N + F+C C F + L+ H++ H
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVH 107
Score = 29.1 bits (62), Expect = 0.87
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 198 CKKSYARKKTLSEHMKIHNNDRRFACA--VCGQAFVQKCSLKGHMKTHH 58
C + ++ L H+++H + +AC C + F + L+ H+ H
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 51.6 bits (118), Expect = 1e-07
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = -3
Query: 213 YECSVCKKSYARKKTLSEHMKIHNNDRRFACAVCGQAFVQKCSLKGHMKT 64
++CS+CKKS+AR+ H ++H + FAC C Q F + +L H K+
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
Score = 45.2 bits (102), Expect = 1e-05
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -2
Query: 649 NYICK--ECGTGFVTRARLKVHFGNTHVG-GAFPCEMCGKMFVTQLRLKNHINSVHKMVK 479
NY+C C F LK H NTH F C +C K F Q + H +H +K
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHM-NTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIK 626
Query: 478 RFRCNKCSERFTEYVYRQKHLEDVHG 401
F C C++RF +H + G
Sbjct: 627 AFACVTCNQRFARMDALNRHYKSEVG 652
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 213 YECSV--CKKSYARKKTLSEHMKIHNNDRRFACAVCGQAFVQKCSLKGHMKTH 61
Y C+ C K + R L HM H N R F C++C ++F ++ + H + H
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = -2
Query: 460 CSERFTEYVYRQKHLEDVHGVPSIKYKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCELC 281
C++RFT + H+ + H ++C++C+KSF+R+++ H ++ H K F C C
Sbjct: 577 CNKRFTRAYNLKSHM-NTH-TNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTC 633
Query: 280 PYKCFSNKQLSMH 242
+ L+ H
Sbjct: 634 NQRFARMDALNRH 646
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 47.2 bits (107), Expect = 3e-06
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -3
Query: 225 GEKIYECSV--CKKSYARKKTLSEHMKIHNNDRRFACAVCGQAFVQKCSLKGHMKTHHLE 52
G+ + C+ C KS+ RK+ L H + H N + F+C+ C +AF + L H++ HL+
Sbjct: 22 GDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 478 RFRCN--KCSERFTEYVYRQKHLEDVHGVPSIKYKCNVCEKSFSRRYNLSMHMKRDHLEE 305
RF C C + FT + ++H V + + C+ C ++F+R L+ H+++ HL++
Sbjct: 25 RFYCTYPDCPKSFTRKEHLRRHERTHENVKA--FSCSFCNRAFARSDVLNRHVQQMHLQK 82
Query: 304 KN 299
+N
Sbjct: 83 QN 84
Score = 32.7 bits (71), Expect = 0.071
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = -2
Query: 454 ERFTEYVYRQKHLEDVHGVPSIKYKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCELCPY 275
E FTE +++ G P C KSF+R+ +L H +R H K F C C
Sbjct: 5 ESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRH-ERTHENVKAFSCSFCNR 63
Query: 274 KCFSNKQLSMHM 239
+ L+ H+
Sbjct: 64 AFARSDVLNRHV 75
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 225 GEKIYECSV--CKKSYARKKTLSEHMKIHNNDRRFACAVCGQAFVQKCSLKGHMKTHHLE 52
G+ Y+C C KS+ RK+ H + H N + F C C +F + L H+ H++
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Query: 51 YN 46
N
Sbjct: 73 QN 74
Score = 29.9 bits (64), Expect = 0.50
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 547 CGKMFVTQLRLKNHINSVHKMVKRFRCNKCSERFTEYVYRQKHLEDVH 404
C K F + + H S H K F C CS FT +H+ H
Sbjct: 24 CTKSFTRKEHARRHFRS-HTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/47 (27%), Positives = 17/47 (36%)
Frame = -2
Query: 631 CGTGFVTRARLKVHFGNTHVGGAFPCEMCGKMFVTQLRLKNHINSVH 491
C F + + HF + AF C C F L H+N H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 43.6 bits (98), Expect = 4e-05
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 198 CKKSYARKKTLSEHMKIHNNDRRFACAVCGQAFVQKCSLKGHMKTH 61
C K ARK + H++ H +DR + C +C FV+ LK H++ H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 388 KYKC--NVCEKSFSRRYNLSMHMKRDHLEEKNFQCELCPYKCFSNKQLSMHMIKHXRG 221
KY C N C K +R+YN+ H++ HL ++ ++C+LC + L H+ H G
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQT-HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Score = 39.1 bits (87), Expect = 8e-04
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 222 EKIYECSVCKKSYARKKTLSEHMKIHNNDRRFACAVCGQAFVQKCSLKGH 73
++ Y C +CK + R L H++IH N R + C C + F + +L H
Sbjct: 470 DRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 32.7 bits (71), Expect = 0.071
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -2
Query: 466 NKCSERFTEYVYRQKHLEDVHGVPSIKYKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCE 287
N C++R + H++ H + Y+C++C+ F R ++L H+ R H + + CE
Sbjct: 448 NGCNKRIARKYNVESHIQ-TH-LSDRPYRCDLCKAGFVRHHDLKRHL-RIHENGRPYVCE 504
Score = 31.5 bits (68), Expect = 0.16
Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -2
Query: 724 FVCQVCECNFETFGA--IERHMNVHY--RNYICKECGTGFVTRARLKVHFGNTHVGGAFP 557
+VC CN +E H+ H R Y C C GFV LK H G +
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 556 CEMCGKMFVTQLRLKNH 506
CE C K F L H
Sbjct: 503 CE-CLKRFNRLDALNRH 518
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 42.7 bits (96), Expect = 7e-05
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 225 GEKIYECSVCKKSYARKKTLSEHMK-IHNNDRRFACAVCGQAFVQKCSLKGHMKTH 61
G K + C C K + R + L H++ +H +++ F C +CG+ F ++ +L+ H + H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -2
Query: 571 GGAFPCEMCGKMFVTQLRLKNHINSVHKMVKRFRCNKCSERFTEYVYRQKHLEDVHGVPS 392
G +F C C K F L+ HI S+H K F C C +RF+ ++H E +H S
Sbjct: 420 GKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH-ERLHVNAS 477
Query: 391 IKYKC 377
+ C
Sbjct: 478 PRLAC 482
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -2
Query: 385 YKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCELCPYKCFSNKQLSMHMIKH 230
+ C C K F R +L H++ H EK F C +C + L H H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 652 RNYICKECGTGFVTRARLKVHFGNTHVG-GAFPCEMCGKMFVTQLRLKNH 506
++++C EC F L+ H + H F C +CGK F + L+ H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 222 EKIYECSVCKKSYARKKTLSEHMKIH-NNDRRFAC 121
EK + C +C K ++R+ L +H ++H N R AC
Sbjct: 449 EKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLAC 482
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 42.7 bits (96), Expect = 7e-05
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 213 YECSVCKKSYARKKTLSEHMKIHNNDRRFAC--AVCGQAFVQKCSLKGHMKTHHL 55
Y C+ C + ++R +L H H +R F C A CG+AF + +++ H + H L
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIHGL 522
Score = 32.7 bits (71), Expect = 0.071
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 664 NVHYRNYICKECGTGFVTRARLKVHFGNTHVG-GAFPCEM--CGKMFVTQLRLKNH 506
NV YR C EC GF + LK+H +H G F C+ CGK F + ++ H
Sbjct: 465 NVRYR---CTECLQGFSRPSSLKIH-TYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 394 SIKYKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCELCPYKCFSNKQLSMHMIKHXR 224
+++Y+C C + FSR +L +H H E+ F C+ C + +M +H R
Sbjct: 465 NVRYRCTECLQGFSRPSSLKIH-TYSHTGERPFVCDYA--GCGKAFNVRSNMRRHQR 518
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 219 KIYECSVCKKSYARKKTLSEHMKIHNNDRRFACAV--CGQAFVQKCSLKGHMKTH 61
K YEC CK+ + R++ H++ H ++ F C+ C + F ++ L H++TH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 484 VKRFRCNKCSERFTEYVYRQKHLEDVHGVPSIKYKCNVCEKSFSRRYNLSMHMKRDHLEE 305
+K + C C F ++ +H+ G + C+K F+RR L H+ R HL +
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHV-RTHLRK 59
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = -3
Query: 219 KIYECSVCKKSYARKKTLSEHMKIHNNDRRFACAV-------CGQAFVQKCSLKGHMKTH 61
K Y C C +++AR + L H++ H N++ F C+ CG+ F ++ L H +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 60 H 58
H
Sbjct: 128 H 128
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 388 KYKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQC 290
+Y C C ++F+R +L H+ R H EK F C
Sbjct: 69 QYVCETCTRAFARLEHLKRHI-RSHTNEKPFTC 100
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 FPCEMCGKMFVTQLRLKNHINSVHKMVKRFRCNK-------CSERFTEYVYRQKHLEDVH 404
+ CE C + F LK HI S H K F C++ C +F+ +H + +H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Query: 403 GVP 395
P
Sbjct: 129 RNP 131
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Frame = -2
Query: 652 RNYICKECGTGFVTRARLKVHFGNTHVGGAFPCEM-------CGKMFVTQLRLKNHINSV 494
+ Y+C+ C F LK H + F C CG+ F + L H +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 493 HK 488
H+
Sbjct: 128 HR 129
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 457 SERFTEYVYRQKHLEDVHGVPSIK-YKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCELC 281
SE T + ++ L + + S + + C+ C K F+R NL+ H K H + + C C
Sbjct: 6 SENSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYC 64
Query: 280 PYKCFSNKQLSMHM 239
KC L H+
Sbjct: 65 EIKCKRKDLLKRHI 78
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = -2
Query: 562 FPCEMCGKMFVTQLRLKNHINSVHKMVKRFRCNKCSERFTEYVYRQKHLEDVHGVPSI 389
FPC+ C K F L H + H + C C + ++H++ H S+
Sbjct: 31 FPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSV 87
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 34.3 bits (75), Expect = 0.023
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 213 YECSVCKKSYARKKTLSEHMKIHNNDRRFACAV--CGQAFVQKCSLKGHMKTH 61
Y+C +C K++ R + + H++ H ++ C C + F + L H + H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -2
Query: 385 YKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCEL--CPYKCFSNKQLSMHMIKHXRGEDL 212
YKC +C K+F R + + H+ R H EK C C + + +L+ H H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHI-RTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Query: 211 R 209
R
Sbjct: 85 R 85
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -3
Query: 225 GEKIYECSV--CKKSYARKKTLSEHMKIHN--NDRRFACA 118
GEK + C+ C K ++R L+ H +IH N RR A A
Sbjct: 50 GEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRRNAAA 89
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -2
Query: 373 VCEKSFSRRYNLSMHMKRDHLEEKN-FQCELC-PYKCFS-NKQLSMHM-IKHXR 224
+C FSR Y+L H H + + F+CE+C + FS + L H+ +KH R
Sbjct: 584 ICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHGR 637
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 30.3 bits (65), Expect = 0.38
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Frame = -2
Query: 595 VHFGNTHVGGAFPCEMCGKMFVTQLRLKNHINSVHKMVKRFR---CNKCSERFTEYVYRQ 425
V+ T G F C +C F + K + + F C++CSE++ +++ Q
Sbjct: 128 VYNPETEEGTMFQCILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEKYRDHLLNQ 187
Query: 424 KHLEDVHGVP------SIKYKCNV--CEKSFSRRYNLSMHM 326
KH E + G S ++ N+ CE S R NL M M
Sbjct: 188 KH-ESIAGTERAPLFLSENFRENLCPCESCISLR-NLEMPM 226
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +2
Query: 11 FFSISKCIYYAKLYSRWCVFMCPFKLHFCTKAWPQTAHANLRSLLWIFICSLKVFLRAYD 190
FF I Y ++ +C H W Q A + RS W+F+C+L + +
Sbjct: 223 FFLIKSISTYIACFAMLIFLLCNVGSHV---VWDQPATVSGRSWSWVFMCALNSSVAGFS 279
Query: 191 FL 196
L
Sbjct: 280 TL 281
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 556 CEMCGKMFVTQLRLKNHINSVHKMVKRFRCNKCSERFTEYVYRQKHLEDVH 404
C+M ++ L+ H+N++ + C KC F+ Y KHL+ H
Sbjct: 1040 CDMVLPSEEFEMHLRGHLNNIRLNCEVSNCKKC---FSNYEDMFKHLQHSH 1087
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 562 FPCEMCGKMFVTQLRLKNHINSVHKM 485
F C+ C MFV Q L NH + H++
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQV 164
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 129 FACAVCGQAFVQKCSLKGHMKTHH 58
F C C FV++ L H +T+H
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYH 162
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 219 KIYECSVCKKSYARKKTLSEHMKIHNNDRRFACAVCG 109
K Y C C K ++ LS + N+ FAC VCG
Sbjct: 134 KGYVCPFCNKKFSSLDVLS----LVTNEGTFACNVCG 166
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 385 YKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCE 287
Y+C VC K + L H HL+ Q +
Sbjct: 399 YRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQ 431
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 400 VPSIKYKCNVCEKSFSRRYNLSMHMKRDHLEEKNFQCELCPYKC 269
+P KC++ +FS R+ H K EKN + E+ P C
Sbjct: 1680 LPQQNEKCSIYPLAFSPRFTYYRHTKCHRRNEKN-EKEIIPDTC 1722
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 583 NTHVGGAFPCEMCGKMFVTQLRLKNHINSVHKMVKRFRCNK-CSERFTEYVYR 428
N +GG F + K++ + ++ K +N + ++KR+ + E F ++V R
Sbjct: 1396 NLMLGGGFYGQRLNKLYRSSVQEKEILNLLRPLIKRYALEREDGEHFGDWVIR 1448
>SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 346 YNLSMHMKRDHLEEKNFQCELCPYKCFSNKQLSM 245
Y +H +DHL QC P +C+ K+LS+
Sbjct: 236 YQRKIHQAKDHLLFSFLQC---PDECYHQKRLSL 266
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = -2
Query: 394 SIKYKCNVCEKSFSRRYNL---SMHMKRDHLEEKNFQCELCPYKCFSNKQ 254
S+ YK VC F +RY + H R LE + E K F K+
Sbjct: 108 SLAYKARVCYLDFLKRYLVQAKDFHSARKKLESRRQAYESLLQKSFKEKK 157
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 655 NERSCDARSRRKSRNYIRKPDTQ 723
NE+ R R+KS+N + +P+ Q
Sbjct: 90 NEKGSSGRKRKKSKNVLAEPNQQ 112
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 78 PLSCISAQKPGRRLRTRTCGHYCGSSYVHSKSSCG 182
PLS +SA R + GH G + +K SCG
Sbjct: 213 PLSVVSAYPNDRLVVAHEIGHILGLIHDCNKKSCG 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,361,996
Number of Sequences: 5004
Number of extensions: 72683
Number of successful extensions: 323
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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