Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E23
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0271 - 16382655-16384451                                         30   2.8  
11_01_0732 + 6065852-6066531,6067066-6067141,6067231-6067357,606...    29   4.9  
10_08_0270 + 16378878-16380566                                         29   6.5  
04_04_0254 - 23951495-23951902,23952000-23952155,23952344-239524...    28   8.6  

>10_08_0271 - 16382655-16384451
          Length = 598

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 550 FFLSGHCTFSFRHLSIASAGFRSFLFSXSPLRTGFVQLVE 669
           FF +G  T+ FR L+   AG+ S LFS   ++     +VE
Sbjct: 301 FFTAGRTTWDFRRLNDGDAGWGSKLFSLPAIKNMTALVVE 340


>11_01_0732 +
           6065852-6066531,6067066-6067141,6067231-6067357,
           6068084-6068289
          Length = 362

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 328 ASGDPRAVDSRPDRIPRQFPHHHHGH 405
           A+  P A D  P   P+  PHH HGH
Sbjct: 23  AAAGPYAGDHGPIARPQGAPHHRHGH 48


>10_08_0270 + 16378878-16380566
          Length = 562

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 550 FFLSGHCTFSFRHLSIASAGFRSFLFSXSPLRTGFVQLVE 669
           FF +G  T+ FR L+   AG+ S LFS   ++     +VE
Sbjct: 265 FFTAGLITWDFRRLADGDAGWGSKLFSLPAIKNMTALVVE 304


>04_04_0254 -
           23951495-23951902,23952000-23952155,23952344-23952485,
           23952772-23953160,23953833-23953948,23954290-23954371
          Length = 430

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 376 RQFPHHHHGHLPSWRSNRTRFFHWAQVFTLTC 471
           R  P HHHGHL S +   T F     +  LTC
Sbjct: 312 RHIPEHHHGHLKSVKI--TGFSSAKSLVELTC 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,281,810
Number of Sequences: 37544
Number of extensions: 293729
Number of successful extensions: 932
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)