Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E23
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016672-7|AAB66119.1|  378|Caenorhabditis elegans Vig (drosophi...    32   0.63 
AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm rece...    29   4.4  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>AF016672-7|AAB66119.1|  378|Caenorhabditis elegans Vig (drosophila
           vasa intronic gene)ortholog protein 1, isoform a
           protein.
          Length = 378

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -3

Query: 537 TLDEYKALRNAQRTAPQYNLRKAGEGE-----DLSPVEKPGSVGTPRRKVTVVMMRKLTR 373
           TL E+KA   A   AP++N RKAGEG       L P++K   V   R +  VV++ K  R
Sbjct: 254 TLKEFKAAAKAD--APKFNTRKAGEGAADTFGKLVPIKK--EVIPDREEDEVVVIHKAPR 309

Query: 372 NTI 364
             +
Sbjct: 310 KQV 312


>AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 207 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 323 QTLLATHALWIVGQIVFLVSFLIITTVTFLLGVPTEPGFSTGLKSSPSPAFLKLYCGAVR 502
           QTL+    ++I G  +FL+SFL I   +F   V         +   P+   +K Y  ++R
Sbjct: 255 QTLIPLFLMYIPGCAMFLLSFLTIDVGSFTGIVTVTIALFPAVDPLPTLIMVKCYRNSLR 314

Query: 503 CALR 514
             LR
Sbjct: 315 SYLR 318


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 115 THCESS*ERGNPCCRRPSAASRGD 186
           THCE     GN CC  P A++  D
Sbjct: 253 THCEKERRDGNKCCSGPLASTMRD 276


>Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical
           protein F33H1.3 protein.
          Length = 359

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 334 GDPRAVDSRPDRIPRQFPHHHHGHLP--SWRSNRTRFFHWAQVFTLTCLPQI 483
           G P + +S P R+P    HHHH H P  S   N   F +  +   ++  PQI
Sbjct: 233 GPPSSYNSMPTRMP----HHHHHHHPHASSHYNPMGFQNHHEEAVISSAPQI 280


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,424
Number of Sequences: 27780
Number of extensions: 239624
Number of successful extensions: 832
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)