Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E22
(838 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 326 2e-90
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 322 5e-89
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 129 4e-31
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 68 1e-12
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.20
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.27
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.82
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.4
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.4
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.5
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 5.8
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.8
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.8
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 326 bits (802), Expect = 2e-90
Identities = 151/230 (65%), Positives = 171/230 (74%)
Frame = -3
Query: 818 YDXCRRNXXIGGPTYTNXXXXXXXXXXXXXXXXXSTAL*MWTSPSSRLTWCLTPXIHFPL 639
YD CRRN I PTY N + P IHFPL
Sbjct: 214 YDICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPL 273
Query: 638 VTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 459
VTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV
Sbjct: 274 VTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQ 333
Query: 458 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 279
AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+
Sbjct: 334 AAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWS 393
Query: 278 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 394 RLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
Score = 64.9 bits (151), Expect = 1e-11
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = -2
Query: 783 PNLHQPDXLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPXYPLP 643
P + LI Q+VSSITASLRF G+LNVDL EFQTNLVPYP P
Sbjct: 226 PTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFP 272
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 322 bits (790), Expect = 5e-89
Identities = 150/230 (65%), Positives = 169/230 (73%)
Frame = -3
Query: 818 YDXCRRNXXIGGPTYTNXXXXXXXXXXXXXXXXXSTAL*MWTSPSSRLTWCLTPXIHFPL 639
YD CRRN I P+Y N + P IHFPL
Sbjct: 210 YDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPL 269
Query: 638 VTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 459
VTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV
Sbjct: 270 VTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQ 329
Query: 458 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 279
AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+
Sbjct: 330 AAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWS 389
Query: 278 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 390 RLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
Score = 66.9 bits (156), Expect = 3e-12
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -2
Query: 783 PNLHQPDXLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPXYPLP 643
P+ + LI Q+VSSITASLRF+G+LNVDL EFQTNLVPYP P
Sbjct: 222 PSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFP 268
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 129 bits (312), Expect = 4e-31
Identities = 65/179 (36%), Positives = 103/179 (57%), Gaps = 3/179 (1%)
Frame = -3
Query: 659 PXIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 480
P +HF +V +AP+ + + + +SV E+T F+ N MV DPRHG+Y+ L+RG
Sbjct: 261 PRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGK 320
Query: 479 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 300
V K+V+ I +++TK + FV+W P + PP DL + + + N+T
Sbjct: 321 VSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNST 372
Query: 299 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 132
+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 373 SIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 39.1 bits (87), Expect = 8e-04
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 783 PNLHQPDXLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 658
P+ + L+ +++ +T S RF G LN DL + N+VP+P
Sbjct: 220 PSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFP 261
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 68.1 bits (159), Expect = 1e-12
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Frame = -3
Query: 662 TPXIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCM 495
+P HF L +Y P + E + +V ++ P NQMV +P + +++
Sbjct: 263 SPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILD 322
Query: 494 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 315
+ +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ + M
Sbjct: 323 IIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----M 377
Query: 314 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 147
L+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L +YE
Sbjct: 378 LANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 783 PNLHQPDXLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 658
P HQ + L+ ++S+ T +LR+ G +N DL +L+P P
Sbjct: 223 PTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSP 264
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -1
Query: 619 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 440
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 439 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 353
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.27
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = -1
Query: 631 TRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*T 458
T S+ P PT+ S +P + T+ ++ + +TPV ++ CT TS P T
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--T 459
Query: 457 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 365
+ S P +N +T S TS P
Sbjct: 460 STPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 27.1 bits (57), Expect = 3.3
Identities = 27/96 (28%), Positives = 45/96 (46%)
Frame = -1
Query: 658 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 479
PV++S++ T SS P T P + T+ ++ + +TPV ++ CT T
Sbjct: 508 PVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTST 559
Query: 478 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 371
S P T P S ++ S++ PV+ + TTS
Sbjct: 560 SVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 26.6 bits (56), Expect = 4.4
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Frame = -1
Query: 664 LPPVSTSHWSRTRQSSLPRRPTMNSFP---SPRSQTHASSPPTRW*NATPVMASTWLAVC 494
+PP S+S T + S P +P + T+ ++ + +TPV ++
Sbjct: 413 VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTN 472
Query: 493 CTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 371
CT TS P T + S P +N +T S TS
Sbjct: 473 CTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.82
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -1
Query: 652 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 473
STS + T SS RP +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 472 PRM*TRPSLPSKPSVLSNSST 410
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 575 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 450
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 447 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 590
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 283 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 110
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 109 EPKSTK 92
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 658 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 542
P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1242 PSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 702 NVDLTEFQTNLVPYPXYPLPTGHVRASHLCREGLP 598
++ L QTNL P + P H SHL + +P
Sbjct: 252 SIPLLGSQTNLQLAPSFAAPQAHPLPSHLSQSNVP 286
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 625 QSSLPRRPTMNSFPSPRSQTHASSPPTR 542
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 451 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 365
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 470 WVRRHHGTAYSKPCTCHDGG 529
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,282,555
Number of Sequences: 5004
Number of extensions: 70465
Number of successful extensions: 269
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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