Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E21
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054...    31   1.4  
11_02_0151 + 8837444-8837876,8838173-8839434,8839517-8839885,883...    29   4.4  
10_07_0133 + 13274190-13274317,13274533-13276371,13277064-132772...    29   4.4  
08_02_1447 - 27162037-27162627,27162790-27162920,27163277-271634...    29   5.8  
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297...    28   7.7  
05_04_0387 - 20834510-20834978,20836866-20837329,20837458-20837634     28   7.7  

>05_04_0028 +
           17302359-17302445,17303887-17303952,17305415-17305489,
           17305638-17305737,17305819-17305865,17305937-17305994,
           17306161-17306210,17306417-17306473,17306561-17306703,
           17306793-17306834,17307083-17307124,17308239-17308272,
           17308342-17308443,17310373-17310652,17311202-17311332,
           17311676-17311773,17312525-17312717
          Length = 534

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 26/66 (39%), Positives = 33/66 (50%)
 Frame = -2

Query: 324 SRRHMRLRSQ*EYWSRSAVREPRSRDPR*WHYTSERKSRSCSPAQSHAQLRDFSSLSCSP 145
           SR     RS+   +SRS  R PRSR     H   + +SRS S ++S  + R   S S SP
Sbjct: 208 SRSRSISRSRSRSYSRS--RSPRSRSASRSHSPVKERSRSASQSRSPVKER---SPSRSP 262

Query: 144 APLFSP 127
            P  SP
Sbjct: 263 PPATSP 268


>11_02_0151 +
           8837444-8837876,8838173-8839434,8839517-8839885,
           8839963-8840223,8840230-8840442,8840602-8840967,
           8841402-8841667,8842087-8842197,8842288-8842317,
           8842444-8842465
          Length = 1110

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +2

Query: 59  LQNINIQSRECGSIPVEEKYKKLGEKSGAGEQERDEKSRSCACDWAGEQERDLRSLV 229
           LQ I +Q  + G      ++ +L E  G  E     + +SC  +W G Q   + S V
Sbjct: 802 LQQI-VQKEKIGEFIPRRQHDELTEALGTTEHSGRVRGQSCRTNWKGSQSTQIPSSV 857


>10_07_0133 +
           13274190-13274317,13274533-13276371,13277064-13277253,
           13277442-13277657
          Length = 790

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -2

Query: 279 RSAVREPRSRDPR*WHYTSERKSRSCSPAQSHAQLRDFSSLSCSPAPLFSPN 124
           R  + +PR+ +P   + T     R C+P  + A   + S+ + SP P F  N
Sbjct: 737 RPWLSDPRADNPPSTNATESLNERRCAPRYNTANSANSSAHAASPTPAFDFN 788


>08_02_1447 -
           27162037-27162627,27162790-27162920,27163277-27163474,
           27164038-27164065
          Length = 315

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 238 LARVTTPGLPYCAPTPVLS 294
           L RVT P LPYCAP  +++
Sbjct: 211 LKRVTNPELPYCAPKNLIT 229


>08_01_0332 +
           2971361-2971439,2971596-2971783,2971985-2972062,
           2972354-2972425,2972513-2972631,2972858-2972942,
           2973096-2973185,2973268-2973369,2973448-2973624,
           2973874-2973954,2974511-2974582,2974662-2974756,
           2974831-2974919,2975016-2975078,2975161-2975204,
           2975554-2975685
          Length = 521

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +2

Query: 2   FFFFFLYKNI*YHHFT*NYLQNINIQSRECGSIPVEEKYKKLGEKSGAGEQERDEKSRS 178
           FFFFF   NI +HH   NYL          G+ PV   ++ +G  +  G  E D   R+
Sbjct: 308 FFFFFFCANILFHHL--NYLLLRMKVIVGIGARPVIGPFEAVGVNTKVGGIEVDSLFRT 364


>05_04_0387 - 20834510-20834978,20836866-20837329,20837458-20837634
          Length = 369

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -3

Query: 308 GSDPSESTGVGAQ*GSPG-VVTRASGTTLASVSHALVPPPSRTHSC 174
           G   + + GVG    +P   + RA G        A  PPP+RT  C
Sbjct: 95  GGGATTTGGVGGDGRAPSSAMPRAQGAEKKKAPSAAAPPPTRTAPC 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,536,374
Number of Sequences: 37544
Number of extensions: 329460
Number of successful extensions: 1045
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)