Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E21
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L08483-1|AAA53472.2| 1477|Drosophila melanogaster ring canal pro...    31   2.5  
BT003250-1|AAO25007.1|  787|Drosophila melanogaster LD29455p pro...    31   2.5  
AE014134-2909|AAN11182.3| 1477|Drosophila melanogaster CG7210-PB...    31   2.5  

>L08483-1|AAA53472.2| 1477|Drosophila melanogaster ring canal protein
            protein.
          Length = 1477

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
 Frame = +3

Query: 168  NRAAVRATGRGNKSVTYAR*CSATSAGHDSGAPLLRSYSSTLTGI*ASYAFDYLIANSRS 347
            N  A R TG   K  T  +    +     + +P+L   +ST +G   + A     A +RS
Sbjct: 1130 NINANRTTGAIPKVKTANKPAKESGGSSTAASPILDKTTSTGSGKSVTLAKKTSTAAARS 1189

Query: 348  TPHTSTQGTGNLAQTMHGSLSTLLI--WL 428
            +    T G G L +    SL  LL+  WL
Sbjct: 1190 SSSGDTNGNGTLNRISKSSLQWLLVNKWL 1218


>BT003250-1|AAO25007.1|  787|Drosophila melanogaster LD29455p
           protein.
          Length = 787

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
 Frame = +3

Query: 168 NRAAVRATGRGNKSVTYAR*CSATSAGHDSGAPLLRSYSSTLTGI*ASYAFDYLIANSRS 347
           N  A R TG   K  T  +    +     + +P+L   +ST +G   + A     A +RS
Sbjct: 440 NINANRTTGAIPKVKTANKPAKESGGSSTAASPILDKTTSTGSGKSVTLAKKTSTAAARS 499

Query: 348 TPHTSTQGTGNLAQTMHGSLSTLLI--WL 428
           +    T G G L +    SL  LL+  WL
Sbjct: 500 SSSGDTNGNGTLNRISKSSLQWLLVNKWL 528


>AE014134-2909|AAN11182.3| 1477|Drosophila melanogaster CG7210-PB,
            isoform B protein.
          Length = 1477

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
 Frame = +3

Query: 168  NRAAVRATGRGNKSVTYAR*CSATSAGHDSGAPLLRSYSSTLTGI*ASYAFDYLIANSRS 347
            N  A R TG   K  T  +    +     + +P+L   +ST +G   + A     A +RS
Sbjct: 1130 NINANRTTGAIPKVKTANKPAKESGGSSTAASPILDKTTSTGSGKSVTLAKKTSTAAARS 1189

Query: 348  TPHTSTQGTGNLAQTMHGSLSTLLI--WL 428
            +    T G G L +    SL  LL+  WL
Sbjct: 1190 SSSGDTNGNGTLNRISKSSLQWLLVNKWL 1218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,877,087
Number of Sequences: 53049
Number of extensions: 543306
Number of successful extensions: 2171
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)