Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E21
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical...    30   1.7  
AC006729-10|AAL32234.1|  487|Caenorhabditis elegans Hypothetical...    29   4.0  
AC006729-9|AAF60470.1|  670|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U41993-5|AAA83447.2|  451|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical
           protein Y39B6A.27 protein.
          Length = 473

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 195 AQSHAQLRDFSSLSCSPAPLFSPNF-LYFSSTGIEPHSLLCIFIF 64
           +QS A  R + + +C+    FSP   LYF + G+   S+  IF+F
Sbjct: 392 SQSFAVARMYHAFACTICFFFSPMVPLYFYTLGLPSLSIFAIFVF 436


>AC006729-10|AAL32234.1|  487|Caenorhabditis elegans Hypothetical
           protein Y24D9A.1b protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +3

Query: 156 RETRNRAAVRAT---GRGNKSVTYAR*CSATSAGHDSGAPLLRSYSSTLTGI*ASYAFDY 326
           +ET+ RA +RA     RG K +  +   S++S  H+S     RS +S       S +F  
Sbjct: 169 QETKKRAELRAEVEKSRGTKQMKKSGVTSSSSRYHNSSNSTPRSMNSAPNSSRVSPSFMS 228

Query: 327 LIANSRSTPHTSTQGT 374
             ++  ST H +T  +
Sbjct: 229 SSSSKASTSHVTTNNS 244


>AC006729-9|AAF60470.1|  670|Caenorhabditis elegans Hypothetical
           protein Y24D9A.1a protein.
          Length = 670

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +3

Query: 156 RETRNRAAVRAT---GRGNKSVTYAR*CSATSAGHDSGAPLLRSYSSTLTGI*ASYAFDY 326
           +ET+ RA +RA     RG K +  +   S++S  H+S     RS +S       S +F  
Sbjct: 169 QETKKRAELRAEVEKSRGTKQMKKSGVTSSSSRYHNSSNSTPRSMNSAPNSSRVSPSFMS 228

Query: 327 LIANSRSTPHTSTQGT 374
             ++  ST H +T  +
Sbjct: 229 SSSSKASTSHVTTNNS 244


>Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical
           protein T05E12.2 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -1

Query: 175 ARFLVSLLFSCSTLLP*LFVLFFYRY*TALSTLYIYIL*IVLG--EMVILNIF 23
           AR ++SL  +   ++     ++FY+Y     T  I+IL I +G  E V L +F
Sbjct: 100 ARSIISLAIAVERVVAAYIPIYFYKYRPIFPTFIIFILSICIGLNEDVFLFVF 152


>U41993-5|AAA83447.2|  451|Caenorhabditis elegans Hypothetical
           protein F44A2.2 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 549 PAACWWCV 572
           PAACWWCV
Sbjct: 352 PAACWWCV 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,674,805
Number of Sequences: 27780
Number of extensions: 275941
Number of successful extensions: 825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)