Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E20
(817 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 66 7e-12
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 63 5e-11
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 54 2e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 31 0.15
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.34
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 28 1.4
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 27 3.2
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 4.2
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.2
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 4.2
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 5.6
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.4
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 7.4
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 26 7.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 65.7 bits (153), Expect = 7e-12
Identities = 27/57 (47%), Positives = 42/57 (73%)
Frame = -1
Query: 481 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 311
ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN
Sbjct: 526 EDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSN 582
Score = 61.7 bits (143), Expect = 1e-10
Identities = 36/72 (50%), Positives = 43/72 (59%)
Frame = -3
Query: 701 GKXELTGXPTXRPXGVPSNXRSPXTXMPAVSSTFPLSRSPPXKENKITITNDKGRLSKEE 522
GK EL+G P P GVP + + + L + K KITITNDKGRLSKEE
Sbjct: 455 GKFELSGIPPA-PRGVPQIEVTFDVDANGILNVSALEKGT-GKTQKITITNDKGRLSKEE 512
Query: 521 IERMVNEAEKYR 486
I+RMV EAEKY+
Sbjct: 513 IDRMVAEAEKYK 524
Score = 46.4 bits (105), Expect = 5e-06
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Frame = -2
Query: 642 EVTXDXDASGIXNVSAIEKSTXQGEQ-DHHYQRQRSSLQGRDRAYG**GREVQKTRMTSK 466
EVT D DA+GI NVSA+EK T + ++ + R S + DR E +K + +
Sbjct: 473 EVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVA----EAEKYKAEDE 528
Query: 465 RRPSRPRMHWNLTASA*SLP-WXXXXXXXXXXXXXXXXXXXXXXXXXSGWIPTSWPX-KE 292
R + +L + A SL W+ ++ K+
Sbjct: 529 AESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKD 588
Query: 291 EYEHKQKELEGIYNPIITKMYQ 226
E+E KQKELE + NPI+ K+YQ
Sbjct: 589 EFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 62.9 bits (146), Expect = 5e-11
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = -3
Query: 701 GKXELTGXPTXRPXGVPSNXRSPXTXMPAVSSTFPLSRSPPXKENKITITNDKGRLSKEE 522
GK EL+G P P GVP + + + L + K KITITNDKGRLSKEE
Sbjct: 455 GKFELSGIPPA-PRGVPQIEVTFDVDANGILNVSALEKGT-GKTQKITITNDKGRLSKEE 512
Query: 521 IERMVNEAEKYR 486
I+RMV+EAEKY+
Sbjct: 513 IDRMVSEAEKYK 524
Score = 62.5 bits (145), Expect = 7e-11
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1
Query: 481 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 311
ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N
Sbjct: 526 EDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHN 582
Score = 52.0 bits (119), Expect = 1e-07
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Frame = -2
Query: 642 EVTXDXDASGIXNVSAIEKSTXQGEQ-DHHYQRQRSSLQGRDRAYG**GREVQKTRMTSK 466
EVT D DA+GI NVSA+EK T + ++ + R S + DR E +K + +
Sbjct: 473 EVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVS----EAEKYKAEDE 528
Query: 465 RRPSRPRMHWNLTASA*SLP-WXXXXXXXXXXXXXXXXXXXXXXXXXSGWIP-TSWPXKE 292
SR + +L + A SL W+ + K+
Sbjct: 529 AETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKD 588
Query: 291 EYEHKQKELEGIYNPIITKMYQ 226
EYE KQKELEG+ NPI+ K+YQ
Sbjct: 589 EYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 54.0 bits (124), Expect = 2e-08
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = -3
Query: 701 GKXELTGXPTXRPXGVPSNXRSPXTXMPAVSSTFPLSRSPPXKENKITITNDKGRLSKEE 522
GK +L G P P GVP + V + + +S K K+ I NDKGRLS+E+
Sbjct: 484 GKFDLRGIPPA-PRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEED 542
Query: 521 IERMVNEAEKY 489
IERMV EAE++
Sbjct: 543 IERMVKEAEEF 553
Score = 53.2 bits (122), Expect = 4e-08
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -1
Query: 481 EDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD 317
ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD D +WL+
Sbjct: 556 EDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLE 611
Score = 27.5 bits (58), Expect = 2.4
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -2
Query: 297 KEEYEHKQKELEGIYNPIITKMY 229
KEE+E ++++L+ + +PI K+Y
Sbjct: 619 KEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 31.5 bits (68), Expect = 0.15
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = -3
Query: 701 GKXELTGXPTXRPXGVPSNXRSPXTXMPAVSSTFPLSRSPPXKENKITITNDKGRLSKEE 522
G +LTG P G P S + + ++ K++ IT+ G L+ E
Sbjct: 498 GNFQLTGI-APAPKGQPQIEVSFDVDADGIINVSARDKAT-NKDSSITVAGSSG-LTDSE 554
Query: 521 IERMVNEAEKYR 486
IE MV +AEKYR
Sbjct: 555 IEAMVADAEKYR 566
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.34
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 544 KVVSPRKRSSV---WLMRQRSTENEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 374
K++ R+++S+ + ++ E+ DDKQ + KN+LE+ M+ + E K
Sbjct: 1256 KLIRGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTG 1314
Query: 373 DSDKQTILDKCNDTIK 326
D ++ LDK D K
Sbjct: 1315 DDNEMEDLDKMEDLEK 1330
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -1
Query: 547 TKVVSPRKRSSVWLMRQRSTENEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 368
T + S + + ++ R T + +++ + A AL + E+ I
Sbjct: 159 TSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKD 218
Query: 367 DKQTILDKCNDTIKWLD 317
+K T+ D+ NDT +WLD
Sbjct: 219 EKYTLYDQ-NDTKEWLD 234
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 620 PAVSSTFPLSRSPPXKENKITITNDKGRLSKE 525
PAVSST P++ +PP + K+T + + SK+
Sbjct: 592 PAVSST-PVTSAPPVSQTKVTKVSVPKKTSKK 622
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 545 KGRLSKEEIERMVNEAEK 492
KG LSKEE+ER V +A K
Sbjct: 525 KGTLSKEELERRVYDAAK 542
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -1
Query: 481 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 320
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 463 ETIQAKNALESYCFSMKSTMED 398
ET+ KNALE Y + ++ ++D
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD 596
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 218 EESPEVCRASRAEHPEPE 165
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 505 MRQRSTENEDDKQKETIQAKNALESYCFSMKST 407
M + + + K+TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQTILTKNAIQDYLVSLKIT 279
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.8 bits (54), Expect = 7.4
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Frame = -1
Query: 541 VVSPRKRSSVWLMRQRSTENEDD---------KQKETIQAKNALESYCFSMKSTMEDEKL 389
V +P++ +STENED K+K IQ KN+ + + ST E
Sbjct: 483 VKAPKETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMP 542
Query: 388 KEKISDSDKQTILDKCND 335
K+ I K +I + +D
Sbjct: 543 KDTIPSRFKTSISTEVHD 560
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 656 VPSNXRSPXTXMPAVSSTFPLSRSPPXKENKITITNDKGRLSKEEIERMVNEA-EKYRKR 480
+PS+ + T P V + FP P K + +G+ S E + + A E+ RKR
Sbjct: 211 LPSSKKRQRTPPPIVVTNFPQEIFPSKKISLSAKRRIQGKYSGENVRARIELARERNRKR 270
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 255 KCLPILSACAHTPPXSASWLESSHLMVSLHLSRMV 359
+CL IL A H P + WL H+++ LH MV
Sbjct: 174 RCLLIL-AVLHIP-VALIWLNLEHILIFLHQDPMV 206
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 448 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 323
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,618,098
Number of Sequences: 5004
Number of extensions: 46913
Number of successful extensions: 202
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -