Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E16
(833 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 67 3e-11
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 67 3e-11
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 67 3e-11
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 67 3e-11
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 67 3e-11
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 67 3e-11
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 67 3e-11
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 67 3e-11
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 67 3e-11
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 66 7e-11
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 66 7e-11
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 66 7e-11
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 66 7e-11
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 66 7e-11
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 66 7e-11
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 41 0.002
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 41 0.002
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 30 4.5
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 30 4.5
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 30 4.5
L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein. 29 5.9
AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p pro... 29 5.9
AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA ... 29 5.9
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 29 7.8
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 29 7.8
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 29 7.8
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 29 7.8
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 29 7.8
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 29 7.8
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 29 7.8
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 29 7.8
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 29 7.8
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 286 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 345
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 346 LVSEYQQ 352
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 286 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 345
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 346 LVSEYQQ 352
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 367 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 426
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 427 LVSEYQQ 433
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 65.7 bits (153), Expect = 7e-11
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG + QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 345 PRGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 404
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 405 LVSEYQQ 411
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 65.7 bits (153), Expect = 7e-11
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG + QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 364 PRGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 423
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 424 LVSEYQQ 430
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 65.7 bits (153), Expect = 7e-11
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG + QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 364 PKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 423
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 424 LVSEYQQ 430
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 65.7 bits (153), Expect = 7e-11
Identities = 33/67 (49%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QE+FK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
L+SEY Q
Sbjct: 418 LISEYQQ 424
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 65.7 bits (153), Expect = 7e-11
Identities = 33/67 (49%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QE+FK + L WY G GMDEMEFT AESNM D
Sbjct: 423 PRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 482
Query: 629 LVSEYXQ 609
L+SEY Q
Sbjct: 483 LISEYQQ 489
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 65.7 bits (153), Expect = 7e-11
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG + QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 364 PKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 423
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 424 LVSEYQQ 430
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG + Q LF+ ++ L WY G GM+E EF A+ +
Sbjct: 357 PRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQA 416
Query: 629 LVSEY 615
++ +Y
Sbjct: 417 IIDDY 421
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG + Q LF+ ++ L WY G GM+E EF A+ +
Sbjct: 357 PRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQA 416
Query: 629 LVSEY 615
++ +Y
Sbjct: 417 IIDDY 421
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A N+ L ++ +
Sbjct: 418 WYVGEGMEEGEFTEARENIAVLERDFEE 445
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 310 QSCPS*SRKNTGNVNTTCYRDITCTS*G 393
+ CP+ ++NT NV T C D+T S G
Sbjct: 1280 RKCPTPPKRNTPNVTTECLNDMTMPSFG 1307
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A N+ L ++ +
Sbjct: 418 WYVGEGMEEGEFTEARENIAVLERDFEE 445
>L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein.
Length = 1429
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1
Query: 538 SCPRSPAPAPRQTLRPRRRWPPGYCXYSETRSXMLLSAXVNSISSMPPP 684
S P PAP P RRR PP Y S+ R L+S S S+ P P
Sbjct: 824 SPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISV---SSSAHPAP 869
>AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p
protein.
Length = 1427
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1
Query: 538 SCPRSPAPAPRQTLRPRRRWPPGYCXYSETRSXMLLSAXVNSISSMPPP 684
S P PAP P RRR PP Y S+ R L+S S S+ P P
Sbjct: 824 SPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISV---SSSAHPAP 869
>AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA
protein.
Length = 1427
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1
Query: 538 SCPRSPAPAPRQTLRPRRRWPPGYCXYSETRSXMLLSAXVNSISSMPPP 684
S P PAP P RRR PP Y S+ R L+S S S+ P P
Sbjct: 824 SPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISV---SSSAHPAP 869
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,981,921
Number of Sequences: 53049
Number of extensions: 535085
Number of successful extensions: 1147
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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