Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E16
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 67 2e-11
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 67 2e-11
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 67 2e-11
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 66 3e-11
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 35 0.062
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 35 0.062
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 31 1.3
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 31 1.3
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 31 1.3
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 31 1.3
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 31 1.3
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 30 1.8
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 30 1.8
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 29 4.1
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 29 4.1
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 29 4.1
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 29 4.1
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 29 4.1
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 29 4.1
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 5.4
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/67 (52%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K IG S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/67 (49%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K +G S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
L+SEY Q
Sbjct: 418 LISEYQQ 424
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K +G S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
LVSEY Q
Sbjct: 418 LVSEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/67 (49%), Positives = 36/67 (53%)
Frame = -1
Query: 809 PXGFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXD 630
P G K +G S QELFK + L WY G GMDEMEFT AESNM D
Sbjct: 358 PRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 629 LVSEYXQ 609
L+SEY Q
Sbjct: 418 LISEYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = -1
Query: 803 GFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXDLV 624
G K I S QE K + L WY M+E EFT AE+ + DL+
Sbjct: 358 GLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLI 414
Query: 623 SEYXQ 609
SE+ Q
Sbjct: 415 SEFQQ 419
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = -1
Query: 803 GFKXXXPXIGXSPXXQELFKXXXGXVXRYVQAXXXLXWYPGGGMDEMEFTXAESNMXDLV 624
G K I S QE K + L WY M+E EFT AE+ + DL+
Sbjct: 358 GLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLI 414
Query: 623 SEYXQ 609
SE+ Q
Sbjct: 415 SEFQQ 419
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EFT A ++ L +Y +
Sbjct: 42 WYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A +M L +Y +
Sbjct: 413 WYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A +M L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A +M L +Y +
Sbjct: 385 WYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 402 WYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 412 WYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 406 WYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 692 WYPGGGMDEMEFTXAESNMXDLVSEYXQ 609
WY G GM+E EF+ A ++ L +Y +
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 179 YLRCNFSSSFCNQCDELLAFSNE 111
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,092
Number of Sequences: 27780
Number of extensions: 277647
Number of successful extensions: 620
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -