Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E15
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical ...   127   1e-29
AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical ...    43   3e-04

>AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18a protein.
          Length = 299

 Score =  127 bits (306), Expect = 1e-29
 Identities = 62/76 (81%), Positives = 68/76 (89%)
 Frame = -1

Query: 746 DSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQA 567
           D DVLQSY+E+SLA L++Y +KE A SEQSSRMTAMD ASKNAGEMIDKLTL FNRTRQA
Sbjct: 224 DDDVLQSYSEYSLAQLIYYGMKESATSEQSSRMTAMDGASKNAGEMIDKLTLAFNRTRQA 283

Query: 566 VITRELIEIISGAAAL 519
           VITRELIEIISGAA +
Sbjct: 284 VITRELIEIISGAACV 299


>AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18b protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -1

Query: 746 DSDVLQSYTEFSLASLLFYALKEGACSE 663
           D DVLQSY+E+SLA L++Y +KE A SE
Sbjct: 224 DDDVLQSYSEYSLAQLIYYGMKESATSE 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,560
Number of Sequences: 27780
Number of extensions: 280076
Number of successful extensions: 620
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)