Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E12
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 326 3e-90
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 322 3e-89
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 133 4e-32
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 70 4e-13
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 37 0.003
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.030
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 34 0.030
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 32 0.12
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 31 0.16
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 31 0.16
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.21
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 30 0.37
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.49
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.65
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 2.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.6
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 27 4.6
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 6.0
SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr 1|||M... 26 6.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.0
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 6.0
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 8.0
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 326 bits (800), Expect = 3e-90
Identities = 142/178 (79%), Positives = 161/178 (90%)
Frame = -2
Query: 670 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 491
YPRIHFPLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRG
Sbjct: 266 YPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRG 325
Query: 490 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 311
DV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNT
Sbjct: 326 DVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNT 385
Query: 310 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 137
T+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 386 TSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
Score = 47.6 bits (108), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -3
Query: 747 SSITASLRFDGALNVDLTEFQTNLVXTP 664
SSITASLRF G+LNVDL EFQTNLV P
Sbjct: 240 SSITASLRFAGSLNVDLNEFQTNLVPYP 267
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 322 bits (792), Expect = 3e-89
Identities = 142/178 (79%), Positives = 159/178 (89%)
Frame = -2
Query: 670 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 491
YPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRG
Sbjct: 262 YPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRG 321
Query: 490 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 311
DV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNT
Sbjct: 322 DVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNT 381
Query: 310 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 137
T+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 382 TSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
Score = 49.2 bits (112), Expect = 7e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -3
Query: 747 SSITASLRFDGALNVDLTEFQTNLVXTP 664
SSITASLRF+G+LNVDL EFQTNLV P
Sbjct: 236 SSITASLRFEGSLNVDLAEFQTNLVPYP 263
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 133 bits (321), Expect = 4e-32
Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Frame = -2
Query: 670 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 491
+PR+HF +V +AP+ + + + +SV E+T F+ N MV DPRHG+Y+ L+RG
Sbjct: 260 FPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRG 319
Query: 490 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 311
V K+V+ I +++TK + FV+W P + PP DL + + + N+
Sbjct: 320 KVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNS 371
Query: 310 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 140
T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 372 TSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 70.1 bits (164), Expect = 4e-13
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Frame = -2
Query: 667 PRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCML 500
PR HF L +Y P + E + +V ++ P NQMV +P + +++ +
Sbjct: 264 PRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDI 323
Query: 499 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 320
+G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ + ML
Sbjct: 324 IQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----ML 378
Query: 319 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 155
+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L +YE
Sbjct: 379 ANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 37.1 bits (82), Expect = 0.003
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 3/156 (1%)
Frame = -3
Query: 639 TRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*T 466
T S+ P PT+ S +P + T+ ++ + +TPV ++ CT TS P T
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--T 459
Query: 465 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSQKLGL 286
+ S P +N +T S TS P T +VP TP S +
Sbjct: 460 STPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCT-TSTSVPYT--STPVTSSNYTI 516
Query: 285 ALTTSSTSCTPSVLSC-TGTSVRVWRRESSPKPVRT 181
+ +T TS + +C T TSV + P+ T
Sbjct: 517 SSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLAT 552
Score = 35.9 bits (79), Expect = 0.007
Identities = 49/195 (25%), Positives = 73/195 (37%), Gaps = 4/195 (2%)
Frame = -3
Query: 666 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 487
P STS S + NS P P + T ++ + P ++ V TV
Sbjct: 253 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS-----TSIPPTGNSTTPVTPTVPP 307
Query: 486 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVST-TSHPPWCPEATWPRFNVP---SACC 319
+ + P P+ S SS+ + S S +T TS PP T VP ++
Sbjct: 308 TSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSST 367
Query: 318 PTPPPSQKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWT 139
TPPP T+SS + S SCT TS + +S PV +P + T
Sbjct: 368 STPPPPASTSSTGTSSSPLLSTST-SCT-TSTSIPPTGNSTTPVTPTVPPTSSSTPLTTT 425
Query: 138 PLKARVREPKSTKPM 94
P ++ P+
Sbjct: 426 NCTTSTSVPYTSTPV 440
Score = 34.3 bits (75), Expect = 0.023
Identities = 54/189 (28%), Positives = 74/189 (39%), Gaps = 17/189 (8%)
Frame = -3
Query: 741 ITASLRFDGALNVDLTEFQTNL-VXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 565
+ ASL + + T T+ TP+ T S T +S T S SP T S
Sbjct: 60 LNASLSTGSPVEITSTSCTTDTSASTPIITESTSSTSSAS-----TTGSSSSPLPSTSTS 114
Query: 564 SPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPV---SRS 394
+ + P S+ L+ T T P + S+P P+ S++ T P+ S S
Sbjct: 115 CTTST--SIPPTGGSSSLSTPITP-TVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTS 171
Query: 393 VST-TSHPPWCPEA--------TWPRFNVPSACCPTPPPSQKL----GLALTTSSTSCTP 253
+T TS PP + T P + S P PP S L T+STSCT
Sbjct: 172 CTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTT 231
Query: 252 SVLSCTGTS 226
S TG S
Sbjct: 232 STSIPTGGS 240
Score = 33.5 bits (73), Expect = 0.040
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Frame = -3
Query: 684 TNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAV 505
T + TPV+T++ + + P ++ + + T ++S P +TPV +S +
Sbjct: 520 TPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPY---TSTPVTSSNYTIS 576
Query: 504 CCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSA 325
T VTS P T + + SVL S+ P S S S+T W +
Sbjct: 577 SSTPVTSTPV--TTTNCTTSTSVLYTSTPITSPNSTSSSST-QVSWNSTTPITGTSTSKV 633
Query: 324 CCPTPPPSQKLGLALT--TSSTSCTPSVLSCTGTSVRVWRRESS 199
T P T TSSTS + S S T TS + ESS
Sbjct: 634 TSSTSIPLTSTNRTSTTFTSSTSISTS-SSSTATSSTSFASESS 676
Score = 31.1 bits (67), Expect = 0.21
Identities = 45/184 (24%), Positives = 84/184 (45%)
Frame = -3
Query: 684 TNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAV 505
T + TP++T++ T +S+P T + +P + T+ ++ + +TPV +S +
Sbjct: 461 TPVTSTPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTSSNYTIS 517
Query: 504 CCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSA 325
T VTS P T + + SVL S+ PV+ + T++ C +T +VP
Sbjct: 518 SSTPVTSTPV--TTTNCTTSTSVLYTST----PVTSTPLATTN---CTTST----SVPYT 564
Query: 324 CCPTPPPSQKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSA 145
TP S ++ +T TS + +CT ++ ++ P T S +++ S
Sbjct: 565 --STPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPITSPNSTSSSSTQVSWNST 622
Query: 144 WTPL 133
TP+
Sbjct: 623 -TPI 625
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.030
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 3/177 (1%)
Frame = -3
Query: 747 SSITASLRFDGALNVDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHA 568
SS++++ + A + L N + +TS S ++ T +S S +
Sbjct: 179 SSLSSTAASNSATSSSLASSSLNSTTSATATS--SSLSSTAASNSATSSSLASSSLNSTT 236
Query: 567 SSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSST-GVQPVSRSV 391
S+ T ++ V +ST L + + T S S L SST P+S +
Sbjct: 237 SATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSAN 296
Query: 390 STTSHPPWCPEATWPRFNVPSACCPTPPPSQKLGLALTTSSTSCTP--SVLSCTGTS 226
STT+ T ++ TP S + T +STS TP SV S T TS
Sbjct: 297 STTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATS 353
Score = 29.9 bits (64), Expect = 0.49
Identities = 41/154 (26%), Positives = 61/154 (39%)
Frame = -3
Query: 684 TNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAV 505
T L + +T+ S + SS + T + PS T +S+P + + T AS+
Sbjct: 253 TPLTSSNSTTAATSASATSSSAQYNTSSLLPS---STPSSTPLSSANSTTATSASSTPLT 309
Query: 504 CCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSA 325
T+ T S S + + +ST P+S STT+ T ++
Sbjct: 310 SVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATS 369
Query: 324 CCPTPPPSQKLGLALTTSSTSCTPSVLSCTGTSV 223
TP S A + SST T S S T TSV
Sbjct: 370 ASSTPLTSVNSTSATSASSTPLT-SANSTTSTSV 402
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 33.9 bits (74), Expect = 0.030
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Frame = -3
Query: 483 YPRM*TRPSLP----SKPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 319
YP P+LP SKP V+ N V P +R + P+ ++P P+ C
Sbjct: 166 YPVSLPSPNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYC 224
Query: 318 PTPPPSQKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSRRITKKSA 145
P+ PP A+ SS S ++ + T + + P + WLP + T
Sbjct: 225 PSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT---- 280
Query: 144 WTPLKARVREPKS 106
+ P A V +P S
Sbjct: 281 FQPPSANVYQPAS 293
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.9 bits (69), Expect = 0.12
Identities = 36/139 (25%), Positives = 56/139 (40%)
Frame = -3
Query: 612 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 433
PT S P PR T S+ R PV+ + A + + P+ SKP+ +
Sbjct: 964 PTSKSKPFPRLATGGSTAAAR--GPRPVVQNKPAAT---------KPVSMPAAKSKPAPM 1012
Query: 432 SNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSQKLGLALTTSSTSCTP 253
+N PVS + T + PP A R N A P + + A T S++ P
Sbjct: 1013 AN------PVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAP 1064
Query: 252 SVLSCTGTSVRVWRRESSP 196
S ++ +S + S+P
Sbjct: 1065 STVTSAASSPSNISKPSAP 1083
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 31.5 bits (68), Expect = 0.16
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 441 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSQKLGL-ALTTSST 265
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 264 SCTPSVLS 241
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 31.5 bits (68), Expect = 0.16
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 441 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSQKLGL-ALTTSST 265
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 264 SCTPSVLS 241
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.21
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -3
Query: 627 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 448
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 447 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 361
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 30.3 bits (65), Expect = 0.37
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -3
Query: 333 PSACCPTPPPSQKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRI 160
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 159 TKKSAWTPLKARVREPKSTK 100
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.49
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = -3
Query: 684 TNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAV 505
++ V + STS + T SS RP +S S +H SS ++ ++ PV ++ +
Sbjct: 369 SSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNS 427
Query: 504 CCTVVTSYPRM*TRPSLPSKPSVLSNSST 418
+ +S+ + SL SKP + ++SS+
Sbjct: 428 TSSRSSSHSSSHSLSSLSSKPILTASSSS 456
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.65
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -3
Query: 489 TSYPRM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 319
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 318 PTPPPSQKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 187
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 675 VXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 550
V P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1239 VPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 583 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 458
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 455 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 598
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.5 bits (58), Expect = 2.6
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = -3
Query: 744 SITASLRFDGALNVDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTH-- 571
SIT++ + +VD+ T PVSTS + + + +P P+ S P+ S ++
Sbjct: 221 SITSTESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPSTLSSPASSSSSYLV 280
Query: 570 -ASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 433
SS T T S + T++ S +LPS S L
Sbjct: 281 ETSSTLTDSVFTTVTATSDSSVITYTLINSVTSSSETTNLPSSSSSL 327
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -3
Query: 459 SLPSKPSVLSNSSTGVQPVSRSVSTT-SHPPWCPEATWPRFNVPSACCPTPPPSQKLGLA 283
S P+ P + + S T PV S S PP P + P + + P PPS +
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 282 LTTSSTSCTP 253
L + P
Sbjct: 459 LPAGMPAAPP 468
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 453 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSQKLG 289
P+ P + S P + S TS PP + P + P + P+ PPS +G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMG 442
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -3
Query: 450 SKPSVLSNSSTGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 304
S P+ S++GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 26.6 bits (56), Expect = 4.6
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = -3
Query: 492 VTSYPRM*TRPSLP--SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 319
+T+ R T+P+ P S+ +N + S S+ S P +A +VP +
Sbjct: 498 LTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGA 557
Query: 318 PTPPPSQKLGLALTTSSTSCTPSVLSCTGT 229
S+ LA SS S +L C GT
Sbjct: 558 RNTAASRPTNLAAGNSSASIVQQLLECGGT 587
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 633 QSSLPRRPTMNSFPSPRSQTHASSPPTR 550
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -3
Query: 756 TDFSSITASLRFDGALNVDLTEFQTNLVXTPVSTSHWSRTRQS--SLPRRPTMNSFPSPR 583
T + ASLR G L++ +TN + + ++ + S +LP T +
Sbjct: 96 TQHNLYVASLRNMGFLSLVFHTKETNSKSSTLHSNPYCPEHHSIRTLPSAVTATTSNIST 155
Query: 582 SQTHASSPPTRW*NAT 535
S +H S P W N+T
Sbjct: 156 SSSHRSDLPNEWTNST 171
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 459 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 373
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 714 ALNVDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSF 595
ALN+D T+F + L S SH + RQ++L N +
Sbjct: 430 ALNIDTTQFPSYLSYHETSVSH-NTYRQNNLEELKNQNDY 468
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 478 WVRRHHGTAYSKPCTCHDGG 537
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,429,033
Number of Sequences: 5004
Number of extensions: 77067
Number of successful extensions: 322
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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