Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E11
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 5e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 5e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 5e-04
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 32 0.56
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 0.74
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 0.74
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.98
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 0.98
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.98
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.98
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.98
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.98
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 1.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.3
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.0
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 5.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 6.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 6.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 6.9
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 6.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 6.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.1
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 28 9.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 594 GGGXXXPPPGGXPX-GGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
GG PPPGG P G PPP P GG G PP P PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 588 GXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
G PPPG P G PPP P GG G PP P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 594 GGGXXXPPPGGXPX-GGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
GG PPPGG P G PPP P G G PP P PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPG-----GCPPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPPGGXPXPPPPXGGXXXFXGGXXXPXXPG 473
P GG P PPGG PPPP F GG P PG
Sbjct: 753 PISGGPPPPPP---PPGGC-PPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 444 GGXXXXXXXXPGXXGXXXPPKXXXXPPXGGGGXG-XPPGGXPXGEXXXXPPP 596
GG P G PP PP GG PPGG P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = -3
Query: 572 PXGGPPX-GXPXPPXPXGGXXXXFXGXXXPPXXRXXXXXXXXPP 444
P G PP G P PP P GG G PP PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGG--GXGXPPGGXPXGEXXXXPPPXG 602
P G PP PP GG PPGG P PPP G
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 594 GGGXXXPPPGGXPX-GGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
GG PPPGG P G PPP P GG G PP P PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 588 GXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
G PPPG P G PPP P GG G PP P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 594 GGGXXXPPPGGXPX-GGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
GG PPPGG P G PPP P G G PP P PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPG-----GCPPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPPGGXPXPPPPXGGXXXFXGGXXXPXXPG 473
P GG P PPGG PPPP F GG P PG
Sbjct: 753 PISGGPPPPPP---PPGGC-PPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 444 GGXXXXXXXXPGXXGXXXPPKXXXXPPXGGGGXG-XPPGGXPXGEXXXXPPP 596
GG P G PP PP GG PPGG P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = -3
Query: 572 PXGGPPX-GXPXPPXPXGGXXXXFXGXXXPPXXRXXXXXXXXPP 444
P G PP G P PP P GG G PP PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGG--GXGXPPGGXPXGEXXXXPPPXG 602
P G PP PP GG PPGG P PPP G
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 594 GGGXXXPPPGGXPX-GGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
GG PPPGG P G PPP P GG G PP P PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 588 GXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
G PPPG P G PPP P GG G PP P PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 594 GGGXXXPPPGGXPX-GGXPPPXPXXGGXXXFXGXXXPPXXPXXXXXX*XXPP 442
GG PPPGG P G PPP P G G PP P PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPG-----GCPPPPPPPPPGGFKGGPPP 369
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPPGGXPXPPPPXGGXXXFXGGXXXPXXPG 473
P GG P PPGG PPPP F GG P PG
Sbjct: 336 PISGGPPPPPP---PPGGC-PPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 444 GGXXXXXXXXPGXXGXXXPPKXXXXPPXGGGGXG-XPPGGXPXGEXXXXPPP 596
GG P G PP PP GG PPGG P PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = -3
Query: 572 PXGGPPX-GXPXPPXPXGGXXXXFXGXXXPPXXRXXXXXXXXPP 444
P G PP G P PP P GG G PP PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGG--GXGXPPGGXPXGEXXXXPPPXG 602
P G PP PP GG PPGG P PPP G
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPGG 362
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -1
Query: 613 FXXXPXGGGXKXXSP--XGXPPGGXPXPPPPXG 521
F P GGG +P G GG P PPPP G
Sbjct: 208 FFTQPRGGGPAPGAPRAGGSGAGGAPRPPPPAG 240
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 570 PGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXP 475
PGG GG PP P GG G PP P
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 570 PGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXP 475
PGG GG PP P GG G PP P
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPP 649
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 0.98
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = -2
Query: 615 FXXXXXGGGGXXXPPPGGXPXGGXPPPXPXXGG---XXXFXGXXXPPXXP 475
F G GG PPP GG PPP P GG G PP P
Sbjct: 73 FIPPPPGPGGIPPPPP--MFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXP-PXGGGGXGXPPG-GXPXGE 575
PG G PP P P G GG PPG G P GE
Sbjct: 155 PGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGE 190
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 615 FXXXXXGGGGXXXPPPGGXPXGGXPPP 535
F GG G PPP G P G PPP
Sbjct: 433 FGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 498 PPKXXXXP--PXGGGGXGXPPGGXPXGEXXXXPPPXG 602
PP P P G GG G PP G P PP G
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGG 429
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +3
Query: 444 GGXXXXXXXXPGXXGXXXPPKXXXX-----PPXGGGGXGXPPGGXPXGEXXXXPPP 596
GG PG G PP+ PP G G G PP G P PPP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFP---PVGAPPP 459
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPPGGXPXGEXXXXPPPXG 602
P G P P G GG G PP P G PPP G
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGGFGPPP---PGGPGAYGPPPTG 450
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 520 PPXGXGGX--GXPXGGPPXGRXXXPPP 594
P G G G P GGPP G PPP
Sbjct: 327 PQQGFGAPPQGPPQGGPPQGSFGAPPP 353
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGX--PPGGXPXGEXXXXPPPXG 602
PG G PP PP G G G PP G P G PPP G
Sbjct: 403 PGGPGGYGPP-----PPGGPGAPGSYGPPQGGPGG---FGPPPPG 439
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 597 GGGGXXXPPPGGXPXGGXPPP 535
GG G PPP G P PPP
Sbjct: 428 GGPGGFGPPPPGGPGAYGPPP 448
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 0.98
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 559 PPGGXPXPPPPXGGXXXFXGGXXXPXXP 476
PP G P PPPP G G P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPP 259
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 594 GGGXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXP 475
G PPP G P G PP P GG G PP P
Sbjct: 295 GSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPP 333
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPP-GGXPXGEXXXXPPP 596
P G PP+ PP G PP GG P PPP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPP-GGXPXGEXXXXPPPXG 602
P G PP PP G PP G P + PPP G
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 487 GXXXPXKXXXXPPXGXGGXGXPXGG--PPXGRXXXPPPP 597
G P + PP G P G PP R PPPP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.98
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 559 PPGGXPXPPPPXGGXXXFXGGXXXPXXP 476
PP G P PPPP G G P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPP 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 594 GGGXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXP 475
G PPP G P G PP P GG G PP P
Sbjct: 316 GSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPP 354
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPP-GGXPXGEXXXXPPP 596
P G PP+ PP G PP GG P PPP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPP-GGXPXGEXXXXPPPXG 602
P G PP PP G PP G P + PPP G
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 487 GXXXPXKXXXXPPXGXGGXGXPXGG--PPXGRXXXPPPP 597
G P + PP G P G PP R PPPP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.98
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 559 PPGGXPXPPPPXGGXXXFXGGXXXPXXP 476
PP G P PPPP G G P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPP 265
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 594 GGGXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPPXXP 475
G PPP G P G PP P GG G PP P
Sbjct: 301 GSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPP 339
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPP-GGXPXGEXXXXPPP 596
P G PP+ PP G PP GG P PPP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXGGGGXGXPP-GGXPXGEXXXXPPPXG 602
P G PP PP G PP G P + PPP G
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 487 GXXXPXKXXXXPPXGXGGXGXPXGG--PPXGRXXXPPPP 597
G P + PP G P G PP R PPPP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 597 GGGGXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPP 484
GGGG PPGG G PP GG G PP
Sbjct: 159 GGGGDPRGPPGGM---GGPPGHGGMGGPPGHGGQGGPP 193
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Frame = +3
Query: 498 PPKXXXXPPXGGGGXGXPPG----GXPXGEXXXXPPPXG 602
PP PP G GG G PPG G P G PP G
Sbjct: 167 PPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPG 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXX--PPXGGGGXGXPPG-GXPXG 572
PG G PP PP GG G PPG G P G
Sbjct: 175 PGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 597 GGGGXXXPPPGGXPXGGXPPPXPXXGGXXXFXGXXXPP 484
GGGG PPGG G PP GG G PP
Sbjct: 439 GGGGDPRGPPGGM---GGPPGHGGMGGPPGHGGQGGPP 473
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Frame = +3
Query: 498 PPKXXXXPPXGGGGXGXPPG----GXPXGEXXXXPPPXG 602
PP PP G GG G PPG G P G PP G
Sbjct: 447 PPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPG 484
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXX--PPXGGGGXGXPPG-GXPXG 572
PG G PP PP GG G PPG G P G
Sbjct: 455 PGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -1
Query: 559 PPG--GXPXPPPPXGGXXXFXGGXXXPXXPGXXXXFXXXPP 443
PPG G P PPPP GG P PG PP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 594 GGGXXXPPPGGXPXGGXPPPXP 529
GG PPPG GG PPP P
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPP 352
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXP-PGGXPXPPPP 527
P GG P G PGG P PPPP
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -1
Query: 559 PPG--GXPXPPPPXGGXXXFXGGXXXPXXPGXXXXFXXXPP 443
PPG G P PPPP GG P PG PP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 594 GGGXXXPPPGGXPXGGXPPPXP 529
GG PPPG GG PPP P
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPP 362
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXP-PGGXPXPPPP 527
P GG P G PGG P PPPP
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPP 363
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 559 PPGGXPXPPPPXGGXXXFXGGXXXPXXP 476
PPGG PPPP G + GG P P
Sbjct: 673 PPGGGQGPPPPPQG-QQYYGGPPPPGQP 699
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 597 GGGGXXXPPPGGXPXGGXPPPXPXXG 520
GG G PP G GG PPP G
Sbjct: 676 GGQGPPPPPQGQQYYGGPPPPGQPYG 701
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 559 PPGGXPXPPPPXGGXXXFXGGXXXPXXP 476
PPGG PPPP G + GG P P
Sbjct: 673 PPGGGQGPPPPPQG-QQYYGGPPPPGQP 699
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 597 GGGGXXXPPPGGXPXGGXPPPXPXXG 520
GG G PP G GG PPP G
Sbjct: 676 GGQGPPPPPQGQQYYGGPPPPGQPYG 701
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 574 SPXGXPPGGXPXPPPPXGGXXXFXGGXXXPXXPG 473
SP G P G P PP P G GG P PG
Sbjct: 247 SPGGPGPAGPPGPPGPPGQDG--SGGAAQPGPPG 278
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 591 GGXXXPPPGGXPXGGXPPPXPXXGG 517
G PPP GG PPP P GG
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPGG 598
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 222 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNP 262
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 252 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFDP 292
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNP 352
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 342 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFDP 382
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 462 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNP 502
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG P G PP GG P P P G GG P P
Sbjct: 282 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAQP--SGGPPGPFNP 322
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG P G PP GG P P P G GG P P
Sbjct: 372 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNP 412
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFNP 442
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG +P G PP GG P P P G GG P P
Sbjct: 432 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFNP 472
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG P G PP GG P P P G GG P P
Sbjct: 162 PSGGPPGLFDPSGAPPSGGPPGPFGPSGAPP--SGGPPGPFNP 202
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPP-GGXPXPPPPXGGXXXFXGGXXXPXXP 476
P GG P G PP GG P P P G GG P P
Sbjct: 207 PSGGPTGPFDPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFDP 247
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/112 (25%), Positives = 33/112 (29%), Gaps = 3/112 (2%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPPGGXPXPPPPXG-GXXXFXGG--XXXPXXPGXXXXFXXXPPXXVX 431
P G G P P G PPPP G G G P P P +
Sbjct: 43 PVGAGVGYAPPPPRPYGATYAPPPPMGIGAGVNPSGYVQQAPPLPTQGYSAYNQQPPPLP 102
Query: 430 QXXXQXXVXPQKPXKXXXPFLRKXFPXRXXIGXXKXIGGGFGVSPRXXXXPP 275
Q Q + P P P + P + IG G + P PP
Sbjct: 103 QQPYQTNMYPSNPGYSSTPGYPQQQPYQ--IGTGATPAGMYPPPPTGQYPPP 152
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 501 PKXXXXPPXGGGGXGXPPGGXPXGEXXXXPPPXG 602
P PP G G PP P G PPP G
Sbjct: 36 PYGAPPPPVGAGVGYAPPPPRPYGATYAPPPPMG 69
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 498 PPKXXXXPPXGGGGXGXPPGGXPXGEXXXXPPPXG 602
PP P GG G PP G P G PPP G
Sbjct: 35 PPPACGNPCGGGFGPPPPPFG-PVGYALPPPPPNG 68
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 594 GGGXXXPPPGGXPXGGXPPPXPXXG 520
GGG PPP P G PP P G
Sbjct: 44 GGGFGPPPPPFGPVGYALPPPPPNG 68
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXG--GGGXGXPPGGXPXGEXXXXPPP 596
P G PP PP G GGG G P P PPP
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 556 PGGXPXPPPPXGGXXXFXGGXXXPXXPG 473
PGG P PPPP F G PG
Sbjct: 573 PGGPPPPPPPPPPSFMFNGKVPNAFSPG 600
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 576 PPPGGXPXGGXPPPXP 529
PPP G GG PPP P
Sbjct: 541 PPPVGMANGGPPPPPP 556
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 597 GGGGXXXPPPG---GXPXGGXPPPXPXXGG 517
GGGG PPP G GG P P GG
Sbjct: 61 GGGGGCCPPPAPACGGGCGGGVAPAPIGGG 90
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 474 PGXXGXXXPPKXXXXPPXG--GGGXGXPPGGXPXGEXXXXPPP 596
P G PP PP G GGG G P P PPP
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 596 GGGGXXXLPXGGPPXGXPXPPXPXG 522
G G LP GP G P PP P G
Sbjct: 172 GQMGVPGLPGDGPTPGSPGPPGPPG 196
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 601 PXGGGXKXXSPXGXPPGGXPXPPPPXGGXXXFXGGXXXPXXPG 473
P G S G P G P PP P G G P PG
Sbjct: 194 PAGADGNTPSGGGEGPAGPPGPPGPAGNPGT-DGAPGNPGAPG 235
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 592 GGXKXXSPXGXPPGGXPXPPPPXGGXXXFXGG 497
GG +P PP P PPPP GG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 592 GGXKXXSPXGXPPGGXPXPPPPXGGXXXFXGG 497
GG +P PP P PPPP GG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 535 GGXGXPXGGPPXGRXXXPPPP 597
GG G GGPP G PP P
Sbjct: 13 GGAGGGGGGPPRGPPQQPPQP 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,849,088
Number of Sequences: 27780
Number of extensions: 192267
Number of successful extensions: 2424
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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