Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E09
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 171 4e-43
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 171 6e-43
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 171 6e-43
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 30 2.5
03_02_0966 + 12783515-12783901 30 2.5
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 29 3.3
06_01_0080 + 644021-645463 29 3.3
04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571 29 5.7
12_02_0205 - 15506167-15507576 28 9.9
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 171 bits (417), Expect = 4e-43
Identities = 89/199 (44%), Positives = 117/199 (58%)
Frame = -1
Query: 720 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTKVGASEATLLNM 541
P+ VV+P NTGL P +TSFFQ L+IPTKI++ ++ T KVG+SE+ LL
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180
Query: 540 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 361
L I PFSYGLV+ VYDSG++F+PE+LD+ +DL KF +GV+ VA++SLAI YPTIA+A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240
Query: 360 PHSIANGFKNLLAIXXXXXXXXXXXXTIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXX 181
PH NG+KN+LA+ IKE++KDPSKF
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEE 300
Query: 180 XXXXXXXXSDDDMGFGLFD 124
SD D+G LFD
Sbjct: 301 KKEEPEEESDGDLGMSLFD 319
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 171 bits (416), Expect = 6e-43
Identities = 83/158 (52%), Positives = 109/158 (68%)
Frame = -1
Query: 720 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTKVGASEATLLNM 541
P+ VV+P NTGL P +TSFFQ L+IPTKI++ ++ T KVG+SE+ LL
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180
Query: 540 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 361
L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +GV+ VA++SLAI YPTIA+A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240
Query: 360 PHSIANGFKNLLAIXXXXXXXXXXXXTIKEFIKDPSKF 247
PH NG+KN+LA+ IKE++KDPSKF
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKF 278
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 171 bits (416), Expect = 6e-43
Identities = 83/158 (52%), Positives = 109/158 (68%)
Frame = -1
Query: 720 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTKVGASEATLLNM 541
P+ VV+P NTGL P +TSFFQ L+IPTKI++ ++ T KVG+SE+ LL
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180
Query: 540 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 361
L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +GV+ VA++SLAI YPTIA+A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240
Query: 360 PHSIANGFKNLLAIXXXXXXXXXXXXTIKEFIKDPSKF 247
PH NG+KN+LA+ IKE++KDPSKF
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKF 278
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 485 PESYTCLTTRPYENGEMFNMLRRVASEAPTLVTGLQ 592
PE LT RP +G+ FN LR ++ +PT GLQ
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQ 392
>03_02_0966 + 12783515-12783901
Length = 128
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 423 AGVANVAALSLAIGYPTIASAPHSIANGFKNLL 325
AG+A VAA++ A+ P +A A +++ KN L
Sbjct: 67 AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFL 99
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 450 PEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLA 322
PE RA F AG A V A +P A+A +S GF+ +A
Sbjct: 35 PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFRGGVA 77
>06_01_0080 + 644021-645463
Length = 480
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 631 NLGRDRKSLEERGLLWTEAGVVGGND 708
N R K++EERGLL+ GV GG +
Sbjct: 110 NTERREKAMEERGLLYLGMGVSGGEE 135
>04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571
Length = 740
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 641 GIERAWKKEVFSGPRPVLWAGMTTDNGQWPXTSWSWTLS 757
G+ R W K++ S P+ V+W NGQ T + +TL+
Sbjct: 365 GLARVWYKDLDSVPQYVVWEQPNAPNGQ-SWTIYVYTLN 402
>12_02_0205 - 15506167-15507576
Length = 469
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -1
Query: 699 AHNTGLGPEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTKVGASEATLLNMLNISPFS 520
A+ +G T F A ++P + S + S V +G +L++ L FS
Sbjct: 187 ANTSGYLATDTFTFGATAVPGVVFGCSDASYGDFAGASGVIGIGRGNLSLISQLQFGKFS 246
Query: 519 YGLVVKQVYDSGT 481
Y L+ + D G+
Sbjct: 247 YQLLAPEATDDGS 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,500,999
Number of Sequences: 37544
Number of extensions: 392817
Number of successful extensions: 897
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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