Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E07
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    35   0.003
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    25   2.0  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    25   2.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   6.1  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   6.1  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   8.1  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
 Frame = +1

Query: 70  REPELAVPRVELRVVLADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVV----- 234
           R+P L  P     V+L+D ++P   Q+    RH+ + +A   H + +  +P  V+     
Sbjct: 586 RQPSLQQPLTTTTVLLSDHYLPLQQQQQQQARHLPQQQA--IHHIHQQQYPRQVIHRRPS 643

Query: 235 ---VALEREVVPGDGKGDSRQVRY--EAAVHDVLPEGDGRGAHRR 354
              V L  E +  DG G S        A   D+ P     G   R
Sbjct: 644 TSSVELSEESMDSDGGGASGDFHCLPSATGRDISPSASAAGLTTR 688


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 229 RAPGGTIRAHGVPVRLHGAGRAEAHGP 149
           R PG  +   G  +R+H + R  A+ P
Sbjct: 53  RVPGWRLSTSGASIRMHASARKRAYCP 79


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 15/64 (23%), Positives = 27/64 (42%)
 Frame = +1

Query: 265 DGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEAA 444
           + K +S  +    ++ D++PE   RG H        +G    +R  R+ D      TE  
Sbjct: 93  NSKSESNNLSLSLSLVDMIPEEKLRGRHSSESDREGMGHDSHKRTHRLSDSDGG-STEGC 151

Query: 445 SVDI 456
           + D+
Sbjct: 152 NYDL 155


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 700 PSGWPFSTIRSGXNG 656
           P GWP S +R+G  G
Sbjct: 3   PYGWPASPLRAGGGG 17


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 136 QDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREV 255
           Q  Q+ H   H  +H+  Q H+     HP H  V  + E+
Sbjct: 305 QQQQQQH---HHHQHQPQQQHQQQYHSHPHHTPVQFKTEL 341


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +1

Query: 139 DPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQVRYEAA 306
           +P   H LRH++   A   H +    HPE  V + E     G  +G+   +R + A
Sbjct: 5   EPLVHHHLRHLRVLAAAADHHLLVHLHPEGCVRSREEHARAGQ-EGNVASLRTQEA 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,699
Number of Sequences: 2352
Number of extensions: 14039
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)