Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E06
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0369 - 24745140-24745510,24746005-24746089,24746746-247468...    31   1.6  
12_01_0399 + 3152219-3152721,3152995-3153127,3155013-3155097,315...    28   8.5  
12_01_0119 + 905916-907277,907737-907774,908269-908492,909411-90...    28   8.5  
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    28   8.5  

>04_04_0369 -
           24745140-24745510,24746005-24746089,24746746-24746878,
           24747764-24748584
          Length = 469

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 24/82 (29%), Positives = 39/82 (47%)
 Frame = -1

Query: 717 VDDRRSRKKEQNKNAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKA 538
           VD +R+++   N+ +A R ++             QTL+   T L  + S LQR+   L +
Sbjct: 267 VDPKRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLSMLQRDTTGLTS 326

Query: 537 LMRDLFKAKGLIK*INQQRRLQ 472
              DL   K  ++ + QQ RLQ
Sbjct: 327 ENSDL---KIRVQTMEQQVRLQ 345


>12_01_0399 +
           3152219-3152721,3152995-3153127,3155013-3155097,
           3155321-3155586
          Length = 328

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -1

Query: 717 VDDRRSRKKEQNKNAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKA 538
           +D +R+++   N+ +A R ++             QTL+   T L  + + LQR+   L A
Sbjct: 161 IDPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTA 220

Query: 537 LMRDL 523
             R+L
Sbjct: 221 ENREL 225


>12_01_0119 +
           905916-907277,907737-907774,908269-908492,909411-909637,
           909733-909980,910275-910557,910707-911135
          Length = 936

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 342 LSEQIRCHIIEQHKLRHHQRDTNNTL 265
           L EQ+R  I++  K +HH +D++N+L
Sbjct: 714 LDEQVRLLILDVAKEQHHYQDSHNSL 739


>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
            852330-852409,852506-852848,853068-853166,853240-853360,
            853567-853723,853976-854099,855275-855368,855866-857259,
            857882-857924,858240-858458,859379-859605,859701-859948,
            860246-860552,860725-861153
          Length = 1486

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 342  LSEQIRCHIIEQHKLRHHQRDTNNTL 265
            L EQ+R  I++  K +HH +D++N+L
Sbjct: 1256 LDEQVRLLILDVAKEQHHYQDSHNSL 1281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,182,405
Number of Sequences: 37544
Number of extensions: 317798
Number of successful extensions: 603
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)