Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_E04
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   200   1e-51
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   200   1e-51
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   200   1e-51
AF068716-6|AAC17744.1|  257|Caenorhabditis elegans Hypothetical ...    28   9.3  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  200 bits (488), Expect = 1e-51
 Identities = 93/111 (83%), Positives = 102/111 (91%)
 Frame = -2

Query: 590 TVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTF 411
           TVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHRSGETEDTF
Sbjct: 353 TVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTF 412

Query: 410 IADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 258
           IADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 413 IADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 463



 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 801 FFKDGXTTLTLRS-RFQSRRXPVIR*XAXVYLTSSKIFPWCPXEDPFDQDDWSAWANLTG 625
           FFKDG   L  ++    S +         +Y +  K +P    ED FDQDDW  W    G
Sbjct: 282 FFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHG 341

Query: 624 RTPIQIVGDDLNGDKP 577
            T IQ+VGDDL    P
Sbjct: 342 ATSIQLVGDDLTVTNP 357


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  200 bits (488), Expect = 1e-51
 Identities = 93/111 (83%), Positives = 102/111 (91%)
 Frame = -2

Query: 590 TVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTF 411
           TVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHRSGETEDTF
Sbjct: 225 TVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTF 284

Query: 410 IADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 258
           IADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 285 IADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 335



 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 801 FFKDGXTTLTLRS-RFQSRRXPVIR*XAXVYLTSSKIFPWCPXEDPFDQDDWSAWANLTG 625
           FFKDG   L  ++    S +         +Y +  K +P    ED FDQDDW  W    G
Sbjct: 154 FFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHG 213

Query: 624 RTPIQIVGDDLNGDKP 577
            T IQ+VGDDL    P
Sbjct: 214 ATSIQLVGDDLTVTNP 229


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  200 bits (488), Expect = 1e-51
 Identities = 93/111 (83%), Positives = 102/111 (91%)
 Frame = -2

Query: 590 TVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTF 411
           TVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHRSGETEDTF
Sbjct: 322 TVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTF 381

Query: 410 IADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 258
           IADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 382 IADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 432



 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 801 FFKDGXTTLTLRS-RFQSRRXPVIR*XAXVYLTSSKIFPWCPXEDPFDQDDWSAWANLTG 625
           FFKDG   L  ++    S +         +Y +  K +P    ED FDQDDW  W    G
Sbjct: 251 FFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHG 310

Query: 624 RTPIQIVGDDLNGDKP 577
            T IQ+VGDDL    P
Sbjct: 311 ATSIQLVGDDLTVTNP 326


>AF068716-6|AAC17744.1|  257|Caenorhabditis elegans Hypothetical
           protein F26D11.9 protein.
          Length = 257

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -1

Query: 660 QDDWSAWANLTGRTPIQIVGDDLNGDKP*AYRYCS*EEGMQLSAIEGQSDRQ 505
           Q DW  +        ++++G     D P A R C  E   +L  I+ Q +R+
Sbjct: 101 QGDWKMFKRQNESVCLRVMGTPNKIDPPTAARLCRKEANGRLMTIDNQQERE 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,606,672
Number of Sequences: 27780
Number of extensions: 330367
Number of successful extensions: 734
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)