Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_E03
(812 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 162 6e-40
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 162 6e-40
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 162 6e-40
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 162 6e-40
AY118783-1|AAM50643.1| 993|Drosophila melanogaster GH13756p pro... 31 1.9
AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH0603... 31 1.9
AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA... 31 1.9
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 30 4.3
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 30 4.3
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 162 bits (393), Expect = 6e-40
Identities = 77/89 (86%), Positives = 84/89 (94%)
Frame = -2
Query: 586 PVXKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
P KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222
Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLAI 320
AA+ L++GYPTIASAPHSIANGFKNLLAI
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Score = 136 bits (328), Expect = 4e-32
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -1
Query: 800 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 621
+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGT
Sbjct: 92 KGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGT 151
Query: 620 IEIINDVHILKPG 582
IEIINDV ILKPG
Sbjct: 152 IEIINDVPILKPG 164
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 162 bits (393), Expect = 6e-40
Identities = 77/89 (86%), Positives = 84/89 (94%)
Frame = -2
Query: 586 PVXKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
P KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222
Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLAI 320
AA+ L++GYPTIASAPHSIANGFKNLLAI
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Score = 136 bits (328), Expect = 4e-32
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -1
Query: 800 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 621
+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGT
Sbjct: 92 KGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGT 151
Query: 620 IEIINDVHILKPG 582
IEIINDV ILKPG
Sbjct: 152 IEIINDVPILKPG 164
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 162 bits (393), Expect = 6e-40
Identities = 77/89 (86%), Positives = 84/89 (94%)
Frame = -2
Query: 586 PVXKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
P KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222
Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLAI 320
AA+ L++GYPTIASAPHSIANGFKNLLAI
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Score = 136 bits (328), Expect = 4e-32
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -1
Query: 800 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 621
+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGT
Sbjct: 92 KGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGT 151
Query: 620 IEIINDVHILKPG 582
IEIINDV ILKPG
Sbjct: 152 IEIINDVPILKPG 164
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 162 bits (393), Expect = 6e-40
Identities = 77/89 (86%), Positives = 84/89 (94%)
Frame = -2
Query: 586 PVXKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
P KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222
Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLAI 320
AA+ L++GYPTIASAPHSIANGFKNLLAI
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Score = 136 bits (328), Expect = 4e-32
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -1
Query: 800 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 621
+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGT
Sbjct: 92 KGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGT 151
Query: 620 IEIINDVHILKPG 582
IEIINDV ILKPG
Sbjct: 152 IEIINDVPILKPG 164
>AY118783-1|AAM50643.1| 993|Drosophila melanogaster GH13756p protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 734 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 609
GA A L +++ +TGL PE T FF+ + PT K + ++
Sbjct: 925 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 963
>AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH06032
protein.
Length = 1225
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 734 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 609
GA A L +++ +TGL PE T FF+ + PT K + ++
Sbjct: 1157 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 1195
>AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA
protein.
Length = 1225
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 734 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 609
GA A L +++ +TGL PE T FF+ + PT K + ++
Sbjct: 1157 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 1195
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -2
Query: 538 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 359
+I F +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 802 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 858
Query: 358 HSIANGFKNL 329
H + FKN+
Sbjct: 859 HVSIDKFKNM 868
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -2
Query: 538 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 359
+I F +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 565 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 621
Query: 358 HSIANGFKNL 329
H + FKN+
Sbjct: 622 HVSIDKFKNM 631
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,757,120
Number of Sequences: 53049
Number of extensions: 603978
Number of successful extensions: 1594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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