Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D20
(805 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 91 2e-18
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 91 2e-18
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 91 2e-18
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 91 2e-18
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 91 2e-18
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 91 2e-18
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 91 2e-18
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 91 2e-18
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 91 2e-18
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 87 2e-17
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 87 2e-17
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 82 1e-15
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 82 1e-15
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 82 1e-15
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 82 1e-15
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 48 2e-05
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 48 2e-05
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 43 4e-04
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 43 4e-04
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 42 7e-04
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 42 7e-04
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 42 7e-04
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 42 7e-04
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 42 7e-04
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 42 7e-04
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 42 7e-04
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 42 7e-04
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 42 7e-04
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 41 0.002
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 41 0.002
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 41 0.002
AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p pro... 35 0.15
AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA... 35 0.15
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 30 4.3
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 29 5.6
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 91.1 bits (216), Expect = 2e-18
Identities = 42/52 (80%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRG-AGAGD 541
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADE+ EFD G GD
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEEGGGD 445
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 91.1 bits (216), Expect = 2e-18
Identities = 42/52 (80%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRG-AGAGD 541
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADE+ EFD G GD
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEEGGGD 445
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 91.1 bits (216), Expect = 2e-18
Identities = 42/52 (80%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRG-AGAGD 541
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADE+ EFD G GD
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEEGGGD 445
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADEDAEF+
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFE 437
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADEDAEF+
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFE 437
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADEDAEF+
Sbjct: 322 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFE 365
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADEDAEF+
Sbjct: 322 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFE 365
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADEDAEF+
Sbjct: 403 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFE 446
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATADEDAEF+
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFE 437
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 87.4 bits (207), Expect = 2e-17
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DL+SEY QYQEATAD++ EFD
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFD 437
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 87.4 bits (207), Expect = 2e-17
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DL+SEY QYQEATAD++ EFD
Sbjct: 459 FLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFD 502
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 81.8 bits (193), Expect = 1e-15
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATAD+ EFD
Sbjct: 381 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD--EFD 422
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 81.8 bits (193), Expect = 1e-15
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATAD+ EFD
Sbjct: 400 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD--EFD 441
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 81.8 bits (193), Expect = 1e-15
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATAD+ EFD
Sbjct: 400 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD--EFD 441
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 81.8 bits (193), Expect = 1e-15
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATAD+ EFD
Sbjct: 400 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD--EFD 441
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -2
Query: 690 LHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRGAGAGDSRTTKS 523
LHWYTGEGM+E EF +A+ + ++ +Y E ED+ G G G S + +S
Sbjct: 394 LHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEG---EDSGGGGGGGGGRSGSAES 446
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -2
Query: 690 LHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRGAGAGDSRTTKS 523
LHWYTGEGM+E EF +A+ + ++ +Y E ED+ G G G S + +S
Sbjct: 394 LHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEG---EDSGGGGGGGGGRSGSAES 446
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADE--DAEFD 562
F+HWY GEGM+E EF EA N+ L ++ + A+E D +FD
Sbjct: 415 FVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGDEDFD 460
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADE--DAEFD 562
F+HWY GEGM+E EF EA N+ L ++ + A+E D +FD
Sbjct: 415 FVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGDEDFD 460
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQ-EATAD--EDAEF 565
F+HWY GEGM+E EF EA ++ L +Y + ++T + ED E+
Sbjct: 404 FVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEEY 449
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQ-EATAD--EDAEF 565
F+HWY GEGM+E EF EA ++ L +Y + ++T + ED E+
Sbjct: 404 FVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEEY 449
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQ-EATAD--EDAEF 565
F+HWY GEGM+E EF EA ++ L +Y + ++T + ED E+
Sbjct: 404 FVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEEY 449
>AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p
protein.
Length = 455
Score = 34.7 bits (76), Expect = 0.15
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 705 QAXXFLHWYTGEGMDEMEFXEAESNMXDLVSEYXQ 601
Q F++ Y GEG++E F EA N+ LV +Y +
Sbjct: 401 QRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLE 435
>AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA
protein.
Length = 455
Score = 34.7 bits (76), Expect = 0.15
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 705 QAXXFLHWYTGEGMDEMEFXEAESNMXDLVSEYXQ 601
Q F++ Y GEG++E F EA N+ LV +Y +
Sbjct: 401 QRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLE 435
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 301 QSCPS*SRKNTGNVNTTCYRDITCTS*G 384
+ CP+ ++NT NV T C D+T S G
Sbjct: 1280 RKCPTPPKRNTPNVTTECLNDMTMPSFG 1307
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -2
Query: 672 EGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRGAGAGDSRTTK 526
E DE +F E N D+ EY +E+ +DED++ G G D K
Sbjct: 475 ESTDE-DFKPNE-NESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKK 521
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,310,037
Number of Sequences: 53049
Number of extensions: 471853
Number of successful extensions: 1018
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -