Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D20
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 88 8e-18
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 84 1e-16
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 83 2e-16
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 83 2e-16
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 82 4e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 45 7e-05
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 44 2e-04
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 43 3e-04
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 42 7e-04
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 42 7e-04
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 42 7e-04
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 42 7e-04
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 41 0.001
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 41 0.001
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 41 0.001
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 41 0.001
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 41 0.001
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 41 0.001
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 41 0.001
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 5.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 87.8 bits (208), Expect = 8e-18
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATAD++ EFD
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEFD 437
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEATA+ED E D
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDGELD 437
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRGAGAGDS 538
FLHWYTGEGMDEMEF EAESNM DL+SEY QYQEATA ED D AG G++
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATA-EDEPLDEFAGEGET 444
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDA 571
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEA ADEDA
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDA 434
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDA 571
FLHWYTGEGMDEMEF EAESNM DLVSEY QYQEA ADEDA
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDA 434
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRGAGAGDS 538
FLHWYTGEGMDEMEF EAESNM DL+SEY QYQEATA++D + AG++
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVDGYAEGEAGET 445
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
F+HW+ GEGM+E EF EA ++ L +Y + TAD + E D
Sbjct: 407 FVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTADLEEEND 450
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQY--QEATADEDAEFDRGAGAG 544
F+HWY GEGM+E EF EA +M L +Y + E D D + RG +G
Sbjct: 410 FVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDIDDQSYRGRSSG 461
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFDRG 556
F+HWY GEGM+E EF EA DL + Y+E AD DA D G
Sbjct: 399 FVHWYVGEGMEEGEFSEARE---DLAALEKDYEEVGADSDAN-DNG 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQY--QEATADEDAEFDRGAGAG 544
F+HWY GEGM+E EF EA +M L +Y + E D D + RG +G
Sbjct: 382 FVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDIDDQSYRGRSSG 433
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQE 592
FLHWYT M+E EF +AE+ + DL+SE+ QY++
Sbjct: 392 FLHWYT---MEESEFTDAENKVNDLISEFQQYEK 422
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQE 592
FLHWYT M+E EF +AE+ + DL+SE+ QY++
Sbjct: 392 FLHWYT---MEESEFTDAENKVNDLISEFQQYEK 422
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
F+HWY GEGM+E EF EA ++ L +Y + + D E D
Sbjct: 409 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDAGEPDEEDD 452
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA +M L +Y + + D + E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSFDPNDE 445
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + +++ E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 445
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + +++ E
Sbjct: 403 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 444
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + +++ E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 445
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAE 568
F+HWY GEGM+E EF EA ++ L +Y + + +++ E
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 445
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
F+HWY GEGM+E EF EA ++ L +Y + A ++E E D
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEEV-GADSNEGLEED 444
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
F+HWY GEGM+E EF EA ++ L +Y + A ++E E D
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAALEKDYEEV-GADSNEGLEED 444
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADEDAEFD 562
F+HWY GEGM+E EF EA ++ L +Y + A ++E E D
Sbjct: 39 FVHWYVGEGMEEGEFTEAREDLAALEKDYEEV-GADSNEGLEED 81
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADED 574
F+HWY GEGM+E EF EA DL + Y+E AD +
Sbjct: 402 FVHWYVGEGMEEGEFTEARE---DLAALEKDYEEVGADSN 438
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADED 574
F+HWY GEGM+E EF EA DL + Y+E AD +
Sbjct: 402 FVHWYVGEGMEEGEFTEARE---DLAALEKDYEEVGADSN 438
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADED 574
F+HWY GEGM+E EF EA DL + Y+E AD +
Sbjct: 402 FVHWYVGEGMEEGEFTEARE---DLAALEKDYEEVGADSN 438
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -2
Query: 693 FLHWYTGEGMDEMEFXEAESNMXDLVSEYXQYQEATADED 574
F+HWY GEGM+E EF EA DL + Y+E AD +
Sbjct: 402 FVHWYVGEGMEEGEFTEARE---DLAALEKDYEEVGADSN 438
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 171 YLRCNFSSSFCNQCDELLAFSNE 103
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,004,199
Number of Sequences: 27780
Number of extensions: 243872
Number of successful extensions: 495
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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