Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D18
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 33 1.7
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 33 1.7
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 33 1.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 2.3
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 32 2.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 2.3
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 32 2.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 2.3
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 31 4.0
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 5.3
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 5.3
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 5.3
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 5.3
AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219... 31 5.3
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 9.3
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 9.3
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 9.3
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 9.3
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 9.3
BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein pr... 30 9.3
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 9.3
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 9.3
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.3
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 9.3
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 9.3
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 9.3
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 9.3
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 9.3
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 9.3
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 9.3
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 9.3
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 9.3
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 9.3
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 9.3
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 9.3
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 9.3
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 673 CPTPLSTR*PPSARPCREASSVPRXRYQCPP-LTPSRSTSRTQ*KRPCRS--QLTSPSTG 503
CP + P+ P A+ +P ++ PP +TP + + TQ P S Q +P+ G
Sbjct: 845 CPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPG 904
Query: 502 HTQSTSRSTCLCTLRSPYRTQL 437
S +++ T+++ + Q+
Sbjct: 905 SVPSATQTQSTPTVQAAAQAQV 926
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 673 CPTPLSTR*PPSARPCREASSVPRXRYQCPP-LTPSRSTSRTQ*KRPCRS--QLTSPSTG 503
CP + P+ P A+ +P ++ PP +TP + + TQ P S Q +P+ G
Sbjct: 845 CPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPG 904
Query: 502 HTQSTSRSTCLCTLRSPYRTQL 437
S +++ T+++ + Q+
Sbjct: 905 SVPSATQTQSTPTVQAAAQAQV 926
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 673 CPTPLSTR*PPSARPCREASSVPRXRYQCPP-LTPSRSTSRTQ*KRPCRS--QLTSPSTG 503
CP + P+ P A+ +P ++ PP +TP + + TQ P S Q +P+ G
Sbjct: 875 CPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPG 934
Query: 502 HTQSTSRSTCLCTLRSPYRTQL 437
S +++ T+++ + Q+
Sbjct: 935 SVPSATQTQSTPTVQAAAQAQV 956
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 655 TR*PPSARPCREASSVPRXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 476
+R P R +S R R + PP + RS SRT RS+ + H +S SR+
Sbjct: 1822 SRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTP 1881
Query: 475 CLCTLRSPYRT 443
+ RS RT
Sbjct: 1882 LISRRRSRSRT 1892
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 604 RXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 443
R R + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1922 RSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1974
Score = 30.3 bits (65), Expect = 9.3
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 655 TR*PPSARPCREASSVP----RXRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQ 494
+R PP R R S P R R + PP+T RS SRT +R RS+ TSP T +
Sbjct: 1925 SRTPPVTRR-RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRR 1981
Query: 493 STSRSTCLCTLRSPYRT 443
S SR++ + RS RT
Sbjct: 1982 SRSRTSPVTRRRSRSRT 1998
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 655 TR*PPSARPCREASSVPRXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 476
+R P R +S R R + PP + RS SRT RS+ + H +S SR+
Sbjct: 854 SRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTP 913
Query: 475 CLCTLRSPYRT 443
+ RS RT
Sbjct: 914 LISRRRSRSRT 924
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 604 RXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 443
R R + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 954 RSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1006
Score = 30.3 bits (65), Expect = 9.3
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 655 TR*PPSARPCREASSVP----RXRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQ 494
+R PP R R S P R R + PP+T RS SRT +R RS+ TSP T +
Sbjct: 957 SRTPPVTRR-RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRR 1013
Query: 493 STSRSTCLCTLRSPYRT 443
S SR++ + RS RT
Sbjct: 1014 SRSRTSPVTRRRSRSRT 1030
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 655 TR*PPSARPCREASSVPRXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 476
+R P R +S R R + PP + RS SRT RS+ + H +S SR+
Sbjct: 1822 SRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTP 1881
Query: 475 CLCTLRSPYRT 443
+ RS RT
Sbjct: 1882 LISRRRSRSRT 1892
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 604 RXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 443
R R + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1922 RSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1974
Score = 30.3 bits (65), Expect = 9.3
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 655 TR*PPSARPCREASSVP----RXRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQ 494
+R PP R R S P R R + PP+T RS SRT +R RS+ TSP T +
Sbjct: 1925 SRTPPVTRR-RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRR 1981
Query: 493 STSRSTCLCTLRSPYRT 443
S SR++ + RS RT
Sbjct: 1982 SRSRTSPVTRRRSRSRT 1998
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 655 TR*PPSARPCREASSVPRXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 476
+R P R +S R R + PP + RS SRT RS+ + H +S SR+
Sbjct: 345 SRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTP 404
Query: 475 CLCTLRSPYRT 443
+ RS RT
Sbjct: 405 LISRRRSRSRT 415
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 604 RXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 443
R R + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 445 RSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 497
Score = 30.3 bits (65), Expect = 9.3
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 655 TR*PPSARPCREASSVP----RXRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQ 494
+R PP R R S P R R + PP+T RS SRT +R RS+ TSP T +
Sbjct: 448 SRTPPVTRR-RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRR 504
Query: 493 STSRSTCLCTLRSPYRT 443
S SR++ + RS RT
Sbjct: 505 SRSRTSPVTRRRSRSRT 521
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 655 TR*PPSARPCREASSVPRXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 476
+R P R +S R R + PP + RS SRT RS+ + H +S SR+
Sbjct: 1870 SRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTP 1929
Query: 475 CLCTLRSPYRT 443
+ RS RT
Sbjct: 1930 LISRRRSRSRT 1940
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 604 RXRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 443
R R + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1970 RSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 2022
Score = 30.3 bits (65), Expect = 9.3
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 655 TR*PPSARPCREASSVP----RXRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQ 494
+R PP R R S P R R + PP+T RS SRT +R RS+ TSP T +
Sbjct: 1973 SRTPPVTRR-RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRR 2029
Query: 493 STSRSTCLCTLRSPYRT 443
S SR++ + RS RT
Sbjct: 2030 SRSRTSPVTRRRSRSRT 2046
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 31.5 bits (68), Expect = 4.0
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = -2
Query: 673 CPTPLSTR*PPSARPC------REASSVPRX----RYQCPPLTPSRSTSRTQ*KRPCRSQ 524
CP P PP+ RPC R SS Y C PL S +T T P
Sbjct: 9 CPAPR----PPALRPCPPPLRGRPGSSTELAPTISHYDCSPLD-STATPSTPGTAPPPKV 63
Query: 523 LTSPSTGHTQSTSRST 476
LTSP+T T ++S++T
Sbjct: 64 LTSPATTPTATSSKAT 79
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 481 FSMWTGYGLSTGMLTGNGTAFSTGYG 558
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 481 FSMWTGYGLSTGMLTGNGTAFSTGYG 558
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 481 FSMWTGYGLSTGMLTGNGTAFSTGYG 558
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 481 FSMWTGYGLSTGMLTGNGTAFSTGYG 558
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219
protein.
Length = 722
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -3
Query: 606 PVQGTSARPLPRREAHPVPSRKGRAV----PS*HPRRQAIPSP 490
P+ TSA P P+ + P P + R+V P P R+A P+P
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTP 260
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 907 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 555
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 571 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 434
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein
protein.
Length = 2210
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 618 PVPYPVQGTSAR-PLPRREAHPVPSRKGRAVPS*HPRRQAIP 496
P P+ + G+S++ PLP AHP+PS AV H +P
Sbjct: 541 PAPHLLAGSSSQTPLPTINAHPLPSGPHHAVHHPHLLPTVLP 582
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 571 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 434
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 457 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 558
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 571 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 434
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 571 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 434
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 571 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 434
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 641 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 633 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 551 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 456
PV VP PV +PV P P+ + +P IE+
Sbjct: 285 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 571 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 434
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,328,644
Number of Sequences: 237096
Number of extensions: 1641563
Number of successful extensions: 5585
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5468
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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