Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D16
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 75 5e-14
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 71 1e-12
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 52 8e-07
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 52 8e-07
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 48 1e-05
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 46 4e-05
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 40 0.002
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 37 0.023
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 35 0.094
07_03_0843 - 21962223-21963815,21963957-21964607 30 2.0
10_08_1046 + 22542074-22544749,22544837-22545544 29 3.5
05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 29 4.7
02_02_0440 - 10273032-10273259,10273423-10273461,10273875-102741... 29 4.7
08_02_0718 + 20382323-20385046 29 6.2
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 6.2
03_05_0078 + 20555296-20555560,20555643-20555887,20555947-205561... 28 8.2
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 75.4 bits (177), Expect = 5e-14
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = -2
Query: 536 KDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSE 357
+ +E +K E SG+ E +L I +C ++ +FA+ L SMKG+GT+D TLIR+VV+R+E
Sbjct: 202 RSLEKVVKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTE 261
Query: 356 IDLGDIKQAFLEKYGKS 306
ID+ IK + +KY KS
Sbjct: 262 IDMQYIKAEYYKKYKKS 278
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 413 KGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKS 306
K +GT++KT IRI RS + + A+ Y +S
Sbjct: 168 KRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRS 203
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = -2
Query: 521 SIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGD 342
++K E SG+ G+L I +C +S +FA+ L+ +MKG+GTND TLIR+V +R+E+D+
Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 341 IKQAFLEKYGKSPGD 297
IK + Y +S D
Sbjct: 310 IKAEYHRSYKRSLAD 324
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = -2
Query: 551 RSLTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIV 372
+ + G D ++KK G E+ + + KC+ + +F++ L+ S++ TN + + R +
Sbjct: 211 KHIYGHDYTKALKKNGFGEFEQSLRVVVKCIYNPSMYFSKLLHRSLQCSATNKRLVTRAI 270
Query: 371 VSRSEIDLGDIKQAFLEKYGKSPGD 297
+ ++D+ IK F YGK D
Sbjct: 271 LGSDDVDMDKIKSVFKSSYGKDLED 295
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = -2
Query: 581 SAAETDLRRVRSLTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIG 402
S +R R G DI + I G + + C+ S FAE + +S+ G+G
Sbjct: 188 SQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSPEKHFAEVIRHSILGLG 247
Query: 401 TNDKTLIRIVVSRSEIDLGDIKQAFLEKY 315
T + L R++VSR+EID+ I++ + +Y
Sbjct: 248 TYEDMLTRVIVSRAEIDMRHIREEYKVRY 276
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = -2
Query: 563 LRRVRSLTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTL 384
L R R GK I++ + + + A C+ S FAE + S+ G+GT+++ L
Sbjct: 259 LERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHFAEVIRTSILGLGTDEEML 318
Query: 383 IRIVVSRSEIDLGDIKQAFLEKY 315
R +VSR+E+D+ +K+ + +Y
Sbjct: 319 TRGIVSRAEVDMEKVKEEYKVRY 341
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/73 (31%), Positives = 45/73 (61%)
Frame = -2
Query: 536 KDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSE 357
KD++ K EF G++ AI +C +F + + ++ G+GT++ +L RI+ +R+E
Sbjct: 145 KDLKADPKDEFLGTLR----AIIRCFTCPDRYFEKVIRLALGGMGTDENSLTRIITTRAE 200
Query: 356 IDLGDIKQAFLEK 318
+DL IK+A+ ++
Sbjct: 201 VDLKLIKEAYQKR 213
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 434 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 309
E+L + KG GTN+K +I I+ R I++A+ E YG+
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGE 59
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/73 (28%), Positives = 43/73 (58%)
Frame = -2
Query: 536 KDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSE 357
KD++ K EF ++ AI +C +F + + ++ G+GT++ +L RI+ +R+E
Sbjct: 220 KDLKADPKDEFLSTLR----AIIRCFCCPDRYFEKVIRLAIAGMGTDENSLTRIITTRAE 275
Query: 356 IDLGDIKQAFLEK 318
+DL I +A+ ++
Sbjct: 276 VDLKLITEAYQKR 288
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 307 PLETWIADDTKGDFKRVLLTLVS*E 233
PLE +A DT GD++R+LL L+ E
Sbjct: 292 PLERAVAGDTSGDYERMLLALLGQE 316
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -2
Query: 467 KCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEK 318
+C+ +F + L +M GTN+ +L R++V +E DL IK AF ++
Sbjct: 211 RCISDANKYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQKR 260
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 34.7 bits (76), Expect = 0.094
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -1
Query: 570 DRSSPSTKLDRKRH*GLDQERILW*H*EGHARYCQMRKEQGRFLR*APVLLDEGHRHQRQ 391
DR DR R G D ER GH R+ + +++ R A D GH H+R
Sbjct: 361 DRERDRRDRDRDRDRGRDYERD---RDRGHDRHRERGRDRERDYERASHERDRGHMHER- 416
Query: 390 DAHPHRGEPLRDRPRGH 340
DA GEP D+ G+
Sbjct: 417 DAEFANGEPKHDQEYGY 433
>07_03_0843 - 21962223-21963815,21963957-21964607
Length = 747
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 369 EPLRDRPRGHQAGIPREVRQVPWRPGSLTIRKETSN 262
EP+ + +GH AGI + V P R +L+++ T N
Sbjct: 202 EPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGN 237
>10_08_1046 + 22542074-22544749,22544837-22545544
Length = 1127
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -1
Query: 336 AGIPREVRQVPWRPGSLTIRKETSNACYSPLFRKSIIIRL 217
AG P+E+ PWRP LT + A SP +R ++IRL
Sbjct: 238 AGHPKELMSKPWRP--LTRKLRIQAAVISP-YRLLVLIRL 274
>05_02_0047 +
6006808-6007129,6009229-6009890,6009980-6010129,
6010765-6010857,6011370-6011675
Length = 510
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 432 APVLLDEGHRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 307
AP+L H H H H E + G + +P +VR V
Sbjct: 283 APLLQPHSHSHSHPHGHGHGHELAQPEGSGGEGEVPAQVRSV 324
>02_02_0440 -
10273032-10273259,10273423-10273461,10273875-10274123,
10274203-10274329,10275009-10275251,10275359-10275457,
10275566-10275681,10275813-10276039,10276164-10276276,
10276402-10276522,10276641-10276855,10277042-10277225,
10277739-10278048,10278155-10278249,10278473-10278485
Length = 792
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 316 YFSRNACLMSPRSISERLTTMRMSVLS 396
YF AC+ P SERL R+SVL+
Sbjct: 519 YFLAAACIFEPNRASERLAWARVSVLA 545
>08_02_0718 + 20382323-20385046
Length = 907
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -2
Query: 590 SLLSAAETDLRRVRSLTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFA-ERLYYSM 414
S+ A+ L +VR + +DIED ++K S + I C+ + F A +R+Y +
Sbjct: 53 SMPKTAKIWLHQVREIN-RDIEDILEKSPSKTCSSKGSNILSCITQPINFVARQRIYKQV 111
Query: 413 KGIGTNDKTL 384
+ + T+
Sbjct: 112 QSLSARIDTI 121
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 408 HRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 307
H H R H HR + +R G AG ++ R+V
Sbjct: 138 HSHHRHGGHHHRSDSVRGGGTGATAGSDKDGREV 171
>03_05_0078 +
20555296-20555560,20555643-20555887,20555947-20556180,
20556451-20556537,20556624-20556959,20557057-20557194,
20557231-20557311,20557392-20557480,20557750-20557813,
20557896-20557985,20558064-20558186
Length = 583
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 310 LPYFSRNACLMSPRSISERLTTMRMSVLSLVP 405
+PY NA +S S+ +R T +M+V S+VP
Sbjct: 505 IPYERTNAKQLSEESLGKRSRTSQMNVKSMVP 536
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,523,337
Number of Sequences: 37544
Number of extensions: 330130
Number of successful extensions: 904
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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