Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D14
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0093 - 15120951-15121344,15121658-15121953,15122119-151224... 34 0.15
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 32 0.45
05_06_0122 - 25775652-25775936,25776027-25776103,25776177-257762... 31 0.79
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 31 1.4
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 30 1.8
08_02_0154 - 13324384-13325351,13326306-13326502,13326695-133272... 30 1.8
08_02_0146 - 13195691-13196658,13197613-13197809,13198002-131984... 30 2.4
04_01_0296 + 3927741-3927960,3928257-3928900 29 3.2
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 5.6
04_01_0107 - 1107976-1108033,1108411-1108638,1110109-1110422,111... 29 5.6
07_01_0160 + 1126674-1126937,1128442-1129998 28 7.4
12_01_0615 + 5072267-5073253 28 9.8
09_03_0203 + 13475118-13475447,13475529-13475660,13475924-134761... 28 9.8
08_01_0554 - 4851698-4851943,4852041-4852760 28 9.8
06_03_0009 + 15350387-15350622,15351122-15351363,15351484-153516... 28 9.8
05_07_0104 + 27715123-27715350 28 9.8
04_03_0672 + 18559984-18559986,18560096-18560569,18560666-185608... 28 9.8
02_05_0781 + 31715100-31715672 28 9.8
>02_03_0093 -
15120951-15121344,15121658-15121953,15122119-15122419,
15123233-15123628,15123883-15124067
Length = 523
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 138 HPLNDSPALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPR--GRPTDGSSRR*STT 305
HP + P L TS+ +PG PV+T G+ + +T R PPR G P S R S++
Sbjct: 405 HP--EGPKLHAITSESQPGQAPVRTGGMRLMTSTGRDNQPPRSSGVPPSPSEWRSSSS 460
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 389 WPSGVSRNTSGTARAAWYGRRTAETDVVGRRLSPRRPVGRASSGWRRVSG 240
W ++ +SGT R +W G R +D + G +G RRV G
Sbjct: 48 WKVHTTKRSSGTRRISWVGERRQRSDEARPERRRQEGAGGRGAGVRRVEG 97
>05_06_0122 -
25775652-25775936,25776027-25776103,25776177-25776281,
25776353-25776542,25776617-25776804,25776882-25777191
Length = 384
Score = 31.5 bits (68), Expect = 0.79
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 PDTRRHPEDARP-TGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGSERD 417
P HP D +P T S P T Q+A A ++ P G AG +
Sbjct: 11 PSVEDHPSDNQPATDNVEPSNEPPTG-------NQSAEAEVGANQEPPTGNQSDAGPSQK 63
Query: 418 TPPTGLLFNSMFGDDSDDENADR 486
P NS G D+D E+ R
Sbjct: 64 VPEVEAQTNSPLGKDADSESETR 86
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +2
Query: 137 PPTKRLPCTLTPDVRSPSGVRTCSD*GGSRG-*HYNPTRGATPRTPDRRVVEAIVDDQRH 313
P T TLTP RSPS T + S + G+TP R + ++
Sbjct: 190 PSTPPSAKTLTPPRRSPSPASTLTPPRRSPSPASRRMSTGSTPALNRTRGPSPVKTNRIS 249
Query: 314 QSPR-YGGHTRPPGRCRWCSGIPRWARTSLPGRNAIHRRPG 433
SP+ G H+ PG + P RTSLP H R G
Sbjct: 250 SSPKLQGWHSNVPG---FSHDAPANLRTSLPDHPLSHSRGG 287
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 198 EPVQTRGVPAVNTTTRHAAPPRGRPTDGSS 287
E + TRG T +HA PPRG P G +
Sbjct: 119 EKMMTRGRAETETARKHAPPPRGLPLLGEA 148
>08_02_0154 -
13324384-13325351,13326306-13326502,13326695-13327274,
13328324-13328446,13328803-13329130
Length = 731
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 84 STICRC*EQIAGPGXFRAHPLNDSPALLHPTSDLRPGSEPVQTRGV 221
ST CRC Q+ HP D P L S+ +PG PV+T G+
Sbjct: 645 STPCRCMRQVGSQ--LGMHP--DGPKLDVTVSESQPGQVPVRTSGM 686
>08_02_0146 -
13195691-13196658,13197613-13197809,13198002-13198479,
13199660-13199782,13200139-13200466
Length = 697
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 84 STICRC*EQIAGPGXFRAHPLNDSPALLHPTSDLRPGSEPVQTRGV 221
ST CRC Q+ HP D P L S+ +PG PV+T G+
Sbjct: 611 STPCRCMRQVGSQ--LGMHP--DGPKLDVTVSESQPGQVPVRTGGM 652
>04_01_0296 + 3927741-3927960,3928257-3928900
Length = 287
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +3
Query: 27 GAEPPTRSPRLGGARGM*DSTICRC*EQIAGPGXFRAHPLNDSPALLHPTSDLRPGSEPV 206
G TR+ G ST CRC Q+ R D P L TS+ + G PV
Sbjct: 205 GTYRETRNVARKEREGSSSSTPCRCMRQVGRQLGMRP----DGPKLHATTSESQAGQVPV 260
Query: 207 QTRGV 221
+T GV
Sbjct: 261 RTGGV 265
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 584 RPKGVETAPHATVTLARWHQED 519
+PKG+ET H V A +H+ED
Sbjct: 443 KPKGIETYIHPAVERAHFHKED 464
>04_01_0107 -
1107976-1108033,1108411-1108638,1110109-1110422,
1110568-1110680,1111740-1111845
Length = 272
Score = 28.7 bits (61), Expect = 5.6
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Frame = +2
Query: 224 RG*HYNPTRGATPR---TPDRRVVEAIV------DDQRHQSPRYGGHTRPPGRCRWCSGI 376
RG Y+ RG R +P RR V + D R +SP YG + R P R+ S
Sbjct: 197 RGDRYDGARGGYGRRDDSPYRRSVSPVYRSRPSPDYGRQRSPVYGSYDRSPVNDRYRSRS 256
Query: 377 P-RWARTSLPGRNA 415
P R +R+ L R A
Sbjct: 257 PVRRSRSPLANRRA 270
>07_01_0160 + 1126674-1126937,1128442-1129998
Length = 606
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 18 VRPGAEPPTRSPRLGGARG 74
VRPG PP R+P GG G
Sbjct: 46 VRPGGRPPPRAPGRGGRAG 64
>12_01_0615 + 5072267-5073253
Length = 328
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Frame = -1
Query: 404 PAGWFWPSGVSRNTSGTARAAWYGRRTAETDVVG--RRLSPR---RPVGRASSGWRRVSG 240
P W W +R G R G+R A + G RR S R RP + +G RR
Sbjct: 134 PRRWTWRRCCTRMRGGGRRDGELGQRGAAAEAAGKERRRSARRRARPARQWRAGGRREER 193
Query: 239 CSVNRG 222
RG
Sbjct: 194 SGARRG 199
>09_03_0203 +
13475118-13475447,13475529-13475660,13475924-13476119,
13476281-13476385,13476726-13476803,13477269-13477346,
13477655-13477983
Length = 415
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 341 RPPGRCRWCSGIPRWAR 391
RP RWC G P+WAR
Sbjct: 99 RPTFGTRWCYGPPQWAR 115
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 346 ARAVPLVFRDTPLGQNQPAG-SERDTPPTGLLFNSMFGDD 462
AR + F D LG N PAG E DTP LL F DD
Sbjct: 164 ARERGMSFGDALLGNNHPAGLREIDTP---LLDEKFFSDD 200
>06_03_0009 +
15350387-15350622,15351122-15351363,15351484-15351648,
15352101-15352198,15352210-15352590
Length = 373
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 144 LNDSPALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPRGRPTDGSSR 290
L D P L S+ +PG PV+T G+ + T+T P+ SSR
Sbjct: 255 LQDGPKLHAIASESQPGQAPVRTGGM-RLMTSTGGTTNPQSEWRSSSSR 302
>05_07_0104 + 27715123-27715350
Length = 75
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 305 GRRLSPRRPVGRASSGWRRVS 243
GRRL P P R W RVS
Sbjct: 31 GRRLHPPAPAARGGGAWNRVS 51
>04_03_0672 +
18559984-18559986,18560096-18560569,18560666-18560836,
18561494-18561640
Length = 264
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 483 PHRSPQPPTRRPVLLVPAR*SDGSVRRSLNP---LRSPRDHHREETAS 617
P R P+PP++ P L PA D + +NP R D HR + S
Sbjct: 41 PRRHPEPPSKSP--LHPAYTPDAQGQSPMNPQHGRRQEADPHRRHSLS 86
>02_05_0781 + 31715100-31715672
Length = 190
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 243 RHAAPPRGRPTDGSSRR*STT 305
RHAA P RP+ +SRR STT
Sbjct: 64 RHAAAPPPRPSASTSRRSSTT 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,178,394
Number of Sequences: 37544
Number of extensions: 525790
Number of successful extensions: 1953
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1950
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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