Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D14
         (791 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.88 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.5  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   3.5  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   6.2  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 0.88
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 25  RGPNLLRGPR-A*GARGVCETQRSAGVESRSRAQGILGP 138
           RGP  L+G + A G +G+   +   G + R+ AQG  GP
Sbjct: 8   RGPQGLQGEKGAPGIQGIRGDKGEMGEQGRTGAQGNAGP 46


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 29  GRTSYEVPAPRGRAGYVRLNDLQVLRADRGPRXF*GPP 142
           G+  Y +P  +G AG      L+  + +RG +   G P
Sbjct: 498 GQPGYGIPGQKGNAGMAGFPGLKGQKGERGFKGVMGTP 535


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 566 TAPHATVTLARWHQEDGTTRRRLRTAMR 483
           TA  AT +L  W + DGT R R+R   R
Sbjct: 234 TAVAATTSL--WERRDGTQRARVRLPRR 259


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 530 HQEDGTTRRRLRTAM 486
           H+EDGTTR  L  AM
Sbjct: 208 HKEDGTTRDLLELAM 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,760
Number of Sequences: 2352
Number of extensions: 16465
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)