Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D14
(791 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 33 1.2
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 33 1.2
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 33 1.2
BC100967-1|AAI00968.1| 193|Homo sapiens chromosome 17 open read... 33 1.2
BC100966-1|AAI00967.1| 193|Homo sapiens chromosome 17 open read... 33 1.2
BC100965-1|AAI00966.1| 193|Homo sapiens chromosome 17 open read... 33 1.2
BC100964-1|AAI00965.2| 193|Homo sapiens chromosome 17 open read... 33 1.2
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 33 1.2
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 33 1.2
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 33 1.2
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 33 1.2
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 33 1.2
BC009448-1|AAH09448.2| 193|Homo sapiens chromosome 17 open read... 32 2.1
AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens ... 32 2.7
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 3.6
BC007767-1|AAH07767.1| 525|Homo sapiens G patch domain containi... 31 3.6
AL833886-1|CAD38742.1| 528|Homo sapiens hypothetical protein pr... 31 3.6
AL356390-10|CAI13564.1| 525|Homo sapiens G patch domain contain... 31 3.6
AL034380-16|CAI21630.1| 525|Homo sapiens G patch domain contain... 31 3.6
AL034380-2|CAI21618.1| 128|Homo sapiens G patch domain containi... 31 3.6
AK022517-1|BAB14074.1| 525|Homo sapiens protein ( Homo sapiens ... 31 3.6
M62728-1|AAA63204.1| 149|Homo sapiens immunoglobulin heavy chai... 31 4.8
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 4.8
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 4.8
BC107801-1|AAI07802.1| 383|Homo sapiens PRPF38B protein protein. 31 4.8
BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for IM... 31 4.8
BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for IM... 31 4.8
BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein. 31 4.8
AY189690-1|AAO85223.1| 131|Homo sapiens transformation-related ... 31 4.8
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 4.8
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 4.8
AL354880-1|CAI18904.1| 173|Homo sapiens SAM domain containing 1... 31 4.8
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 4.8
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 4.8
AL034350-1|CAI23090.1| 173|Homo sapiens SAM domain containing 1... 31 4.8
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 31 4.8
AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming gro... 30 8.3
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 199 NLFRLGGFPRLTLQPDTRRHP---EDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
+LFR P LQP R P RPT ++RRP+ + + RR A+
Sbjct: 70 SLFREQDAPVAGLQPVERAQPGWGSPRRPT--EAEARRPSRAQQS-RRVQPPAQTR---- 122
Query: 370 RDTPLGQNQPAGSERDTP 423
R TPLGQ QPA R P
Sbjct: 123 RSTPLGQQQPAPRTRAAP 140
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 241 PDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGS 408
PD P+++R RR R P S+ ARA P + P Q+ PAG+
Sbjct: 223 PDEEFDPQNSRLAPRRWAERSPNLRRSSAAGEGTLARAQPPAPQSPPAPQSPPAGT 278
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 PGXFRAHPLNDS-PALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPRGRPTDG 281
PG A P + S P PTS PGS P T P T+ APP P+ G
Sbjct: 119 PGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG 173
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 199 NLFRLGGFPRLTLQPDTRRHP---EDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
+LFR P LQP R P RPT ++RRP+ + + RR A+
Sbjct: 70 SLFREQDAPVAGLQPVERAQPGWGSPRRPT--EAEARRPSRAQQS-RRVQPPAQTR---- 122
Query: 370 RDTPLGQNQPAGSERDTP 423
R TPLGQ QPA R P
Sbjct: 123 RSTPLGQQQPAPRTRAAP 140
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 241 PDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGS 408
PD P+++R RR R P S+ ARA P + P Q+ PAG+
Sbjct: 223 PDEEFDPQNSRLAPRRWAERSPNLRRSSAAGEGTLARAQPPAPQSPPAPQSPPAGT 278
>BC100967-1|AAI00968.1| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 314 QSPRYGGHTRPPGRCRWCSGIPRWARTSLPGRNAIHRRPG 433
Q+P +G RP W G P W P RNA RPG
Sbjct: 26 QAPSWGSPGRPAAHSPWACGPPHWGPQRGP-RNAAAARPG 64
>BC100966-1|AAI00967.1| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 314 QSPRYGGHTRPPGRCRWCSGIPRWARTSLPGRNAIHRRPG 433
Q+P +G RP W G P W P RNA RPG
Sbjct: 26 QAPSWGSPGRPAAHSPWACGPPHWGPQRGP-RNAAAARPG 64
>BC100965-1|AAI00966.1| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 314 QSPRYGGHTRPPGRCRWCSGIPRWARTSLPGRNAIHRRPG 433
Q+P +G RP W G P W P RNA RPG
Sbjct: 26 QAPSWGSPGRPAAHSPWACGPPHWGPQRGP-RNAAAARPG 64
>BC100964-1|AAI00965.2| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 314 QSPRYGGHTRPPGRCRWCSGIPRWARTSLPGRNAIHRRPG 433
Q+P +G RP W G P W P RNA RPG
Sbjct: 26 QAPSWGSPGRPAAHSPWACGPPHWGPQRGP-RNAAAARPG 64
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 199 NLFRLGGFPRLTLQPDTRRHP---EDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
+LFR P LQP R P RPT ++RRP+ + + RR A+
Sbjct: 70 SLFREQDAPVAGLQPVERAQPGWGSPRRPT--EAEARRPSRAQQS-RRVQPPAQTR---- 122
Query: 370 RDTPLGQNQPAGSERDTP 423
R TPLGQ QPA R P
Sbjct: 123 RSTPLGQQQPAPRTRAAP 140
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 241 PDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGS 408
PD P+++R RR R P S+ ARA P + P Q+ PAG+
Sbjct: 223 PDEEFDPQNSRLAPRRWAERSPNLRRSSAAGEGTLARAQPPAPQSPPAPQSPPAGT 278
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 PGXFRAHPLNDS-PALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPRGRPTDG 281
PG A P + S P PTS PGS P T P T+ APP P+ G
Sbjct: 119 PGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG 173
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 PGXFRAHPLNDS-PALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPRGRPTDG 281
PG A P + S P PTS PGS P T P T+ APP P+ G
Sbjct: 46 PGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG 100
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 PGXFRAHPLNDS-PALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPRGRPTDG 281
PG A P + S P PTS PGS P T P T+ APP P+ G
Sbjct: 119 PGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG 173
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 199 NLFRLGGFPRLTLQPDTRRHP---EDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
+LFR P LQP R P RPT ++RRP+ + + RR A+
Sbjct: 70 SLFREQDAPVAGLQPVERAQPGWGSPRRPT--EAEARRPSRAQQS-RRVQPPAQTR---- 122
Query: 370 RDTPLGQNQPAGSERDTP 423
R TPLGQ QPA R P
Sbjct: 123 RSTPLGQQQPAPRTRAAP 140
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 241 PDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGS 408
PD P+++R RR R P S+ ARA P + P Q+ PAG+
Sbjct: 223 PDEEFDPQNSRLAPRRWAERSPNLRRSSAAGEGTLARAQPPAPQSPPAPQSPPAGT 278
>BC009448-1|AAH09448.2| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 314 QSPRYGGHTRPPGRCRWCSGIPRWARTSLPGRNAIHRRPG 433
Q+P +G RP W G P W P RNA RPG
Sbjct: 26 QAPSWGRPGRPAAHSPWACGPPHWGPQRGP-RNAAAARPG 64
>AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ45445 fis, clone BRSSN2013696. ).
Length = 259
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -2
Query: 151 SFSGWALKXPGPAICSQHLQIVESHIPRAPPRRGDLVGGS---APGRTK 14
S +GW GPA+ SQ + PR PP L+GG PGR++
Sbjct: 76 SSTGWRTASAGPALASQGPLQAQLLPPRRPPGARSLLGGRRGLGPGRSR 124
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 PGXFRAHPLNDS-PALLHPTSDLRPGSEPVQTRGVPAVNTTTRHAAPPRGRPTDG 281
PG P + S P PTS PGS P T P T+ APP P+ G
Sbjct: 119 PGVGSTPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG 173
>BC007767-1|AAH07767.1| 525|Homo sapiens G patch domain containing
3 protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.6
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 193 GQNL-FRLGGFPRLTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
GQ L R G P L D + HP R G G+ +P ++RP + +
Sbjct: 426 GQGLGCRCSGVPE-ALDSDGQ-HPRCKRGLGYHGEKLQP---FGQLKRPRRNGLGLISTI 480
Query: 370 RDTPLGQNQPAGSERDTPPTGLLFNS 447
D PL Q+Q R PPT + F +
Sbjct: 481 YDEPLPQDQTESLLRRQPPTSMKFRT 506
>AL833886-1|CAD38742.1| 528|Homo sapiens hypothetical protein
protein.
Length = 528
Score = 31.5 bits (68), Expect = 3.6
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 193 GQNL-FRLGGFPRLTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
GQ L R G P L D + HP R G G+ +P ++RP + +
Sbjct: 429 GQGLGCRCSGVPE-ALDSDGQ-HPRCKRGLGYHGEKLQP---FGQLKRPRRNGLGLISTI 483
Query: 370 RDTPLGQNQPAGSERDTPPTGLLFNS 447
D PL Q+Q R PPT + F +
Sbjct: 484 YDEPLPQDQTESLLRRQPPTSMKFRT 509
>AL356390-10|CAI13564.1| 525|Homo sapiens G patch domain containing
3 protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.6
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 193 GQNL-FRLGGFPRLTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
GQ L R G P L D + HP R G G+ +P ++RP + +
Sbjct: 426 GQGLGCRCSGVPE-ALDSDGQ-HPRCKRGLGYHGEKLQP---FGQLKRPRRNGLGLISTI 480
Query: 370 RDTPLGQNQPAGSERDTPPTGLLFNS 447
D PL Q+Q R PPT + F +
Sbjct: 481 YDEPLPQDQTESLLRRQPPTSMKFRT 506
>AL034380-16|CAI21630.1| 525|Homo sapiens G patch domain containing
3 protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.6
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 193 GQNL-FRLGGFPRLTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
GQ L R G P L D + HP R G G+ +P ++RP + +
Sbjct: 426 GQGLGCRCSGVPE-ALDSDGQ-HPRCKRGLGYHGEKLQP---FGQLKRPRRNGLGLISTI 480
Query: 370 RDTPLGQNQPAGSERDTPPTGLLFNS 447
D PL Q+Q R PPT + F +
Sbjct: 481 YDEPLPQDQTESLLRRQPPTSMKFRT 506
>AL034380-2|CAI21618.1| 128|Homo sapiens G patch domain containing
3 protein.
Length = 128
Score = 31.5 bits (68), Expect = 3.6
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 193 GQNL-FRLGGFPRLTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
GQ L R G P L D + HP R G G+ +P ++RP + +
Sbjct: 44 GQGLGCRCSGVPE-ALDSDGQ-HPRCKRGLGYHGEKLQP---FGQLKRPRRNGLGLISTI 98
Query: 370 RDTPLGQNQPAGSERDTPPTGLLFNS 447
D PL Q+Q R PPT + F +
Sbjct: 99 YDEPLPQDQTESLLRRQPPTSMKFRT 124
>AK022517-1|BAB14074.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ12455 fis, clone NT2RM1000563, weakly similar to
TRANSMISSION-BLOCKING TARGET ANTIGEN S230 PRECURSOR. ).
Length = 525
Score = 31.5 bits (68), Expect = 3.6
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 193 GQNL-FRLGGFPRLTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVF 369
GQ L R G P L D + HP R G G+ +P ++RP + +
Sbjct: 426 GQGLGCRCSGVPE-ALDSDGQ-HPRCKRGLGYHGEKLQP---FGQLKRPRRNGLGLISTI 480
Query: 370 RDTPLGQNQPAGSERDTPPTGLLFNS 447
D PL Q+Q R PPT + F +
Sbjct: 481 YDEPLPQDQTESLLRRQPPTSMKFRT 506
>M62728-1|AAA63204.1| 149|Homo sapiens immunoglobulin heavy chain
protein.
Length = 149
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -2
Query: 262 RGGAACRVVVLTAGTPLV*TGSDPGRRSDVGCKSAGESFSG----WALKXPGPAI 110
RGG C+V ++ +G +V PGR + C ++G SFS W + PG +
Sbjct: 15 RGGVQCQVQLVESGGGVV----QPGRSLRLSCAASGFSFSSYGMHWVRQCPGKGL 65
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>BC107801-1|AAI07802.1| 383|Homo sapiens PRPF38B protein protein.
Length = 383
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for
IMAGE:4122390) protein.
Length = 465
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for
IMAGE:3538108) protein.
Length = 474
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein.
Length = 465
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>AY189690-1|AAO85223.1| 131|Homo sapiens transformation-related
protein 4 protein.
Length = 131
Score = 31.1 bits (67), Expect = 4.8
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -1
Query: 416 SRSDPAGWFWPSGVSRNTSGTARAA---WYGRRTAETDVVGRRLSPRRPVGRASSGWRRV 246
+ + P W+ P+G SR + T+R++ GRR+ R P R G R
Sbjct: 53 AEASPGSWWNPTGRSRRQARTSRSSSLVQTGRRSPSNSTSVRCPGSPSPT-RMRPGGRAS 111
Query: 245 SGCSVNRGNPPS 210
+GC+ ++ +P S
Sbjct: 112 TGCTESKASPRS 123
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 151 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 204
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>AL354880-1|CAI18904.1| 173|Homo sapiens SAM domain containing 1
protein.
Length = 173
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 118 AQGILGPTH*TTPLHSYTRRPISVRGQNLFRLGGFPRLTLQPDTRRHPEDARPTGRRGD 294
A G+L P H L + R +R Q+ G + L QP P DA PTGRRG+
Sbjct: 43 AIGVLAPAHRRRILEAVRR----LREQDANAAGLYFTLEPQPAPPGPPADAVPTGRRGE 97
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 151 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 204
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>AL034350-1|CAI23090.1| 173|Homo sapiens SAM domain containing 1
protein.
Length = 173
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 118 AQGILGPTH*TTPLHSYTRRPISVRGQNLFRLGGFPRLTLQPDTRRHPEDARPTGRRGD 294
A G+L P H L + R +R Q+ G + L QP P DA PTGRRG+
Sbjct: 43 AIGVLAPAHRRRILEAVRR----LREQDANAAGLYFTLEPQPAPPGPPADAVPTGRRGE 97
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 552 SVRRSLNPLRSP-----RDHHRE-ETASS*GLELDKRPLRPRXDGXARAKXXKK 695
S RRSL+P RSP R HHRE +SS EL++ R R + A+ + ++
Sbjct: 262 SPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 315
>AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming growth
factor beta binding protein 2 variant protein.
Length = 1700
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 241 PDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGS 408
PD P+++R RR R P S+ ARA P + P Q+ PAG+
Sbjct: 102 PDEEFDPQNSRLAPRRWAERSPNLRRSSAAGEGTLARAQPPAPQSPPAPQSPPAGT 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,898,844
Number of Sequences: 237096
Number of extensions: 2778026
Number of successful extensions: 11020
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 10029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10999
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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