Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D12
         (852 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033762-1|AAH33762.1|  506|Homo sapiens PEO1 protein protein.        202   1e-51
AL133215-11|CAI10925.1|  684|Homo sapiens progressive external o...   202   1e-51
AK025485-1|BAB15148.1|  506|Homo sapiens protein ( Homo sapiens ...   202   1e-51
AF292004-1|AAK69558.1|  684|Homo sapiens putative T7-like mitoch...   202   1e-51
BC013349-1|AAH13349.1|  451|Homo sapiens PEO1 protein protein.        128   3e-29
AL133215-10|CAI10924.1|  582|Homo sapiens progressive external o...   128   3e-29
AF292005-1|AAK69559.1|  582|Homo sapiens truncated putative T7-l...   128   3e-29
BC062215-1|AAH62215.1|  105|Homo sapiens CLSPN protein protein.        31   5.3  
U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility prot...    31   7.0  
BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility ge...    31   7.0  
AJ242976-1|CAB45133.1|  380|Homo sapiens p241 protein protein.         30   9.3  

>BC033762-1|AAH33762.1|  506|Homo sapiens PEO1 protein protein.
          Length = 506

 Score =  202 bits (494), Expect = 1e-51
 Identities = 89/160 (55%), Positives = 125/160 (78%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 303 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 361

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKASQEADNVLIIQDKRLTAVRG 340
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAKASQEADNVLI+QD++L    G
Sbjct: 362 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPG 421

Query: 339 KKFLQVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLE 220
           K++LQV+KNR+ GD+G+ PL+F+K+SL++    KNK +L+
Sbjct: 422 KRYLQVSKNRFDGDVGVFPLEFNKNSLTFSIPPKNKARLK 461


>AL133215-11|CAI10925.1|  684|Homo sapiens progressive external
           ophthalmoplegia 1 protein.
          Length = 684

 Score =  202 bits (494), Expect = 1e-51
 Identities = 89/160 (55%), Positives = 125/160 (78%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 481 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 539

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKASQEADNVLIIQDKRLTAVRG 340
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAKASQEADNVLI+QD++L    G
Sbjct: 540 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPG 599

Query: 339 KKFLQVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLE 220
           K++LQV+KNR+ GD+G+ PL+F+K+SL++    KNK +L+
Sbjct: 600 KRYLQVSKNRFDGDVGVFPLEFNKNSLTFSIPPKNKARLK 639


>AK025485-1|BAB15148.1|  506|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21832 fis, clone HEP01571. ).
          Length = 506

 Score =  202 bits (494), Expect = 1e-51
 Identities = 89/160 (55%), Positives = 125/160 (78%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 303 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 361

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKASQEADNVLIIQDKRLTAVRG 340
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAKASQEADNVLI+QD++L    G
Sbjct: 362 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPG 421

Query: 339 KKFLQVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLE 220
           K++LQV+KNR+ GD+G+ PL+F+K+SL++    KNK +L+
Sbjct: 422 KRYLQVSKNRFDGDVGVFPLEFNKNSLTFSIPPKNKARLK 461


>AF292004-1|AAK69558.1|  684|Homo sapiens putative T7-like
           mitochondrial DNA helicase protein.
          Length = 684

 Score =  202 bits (494), Expect = 1e-51
 Identities = 89/160 (55%), Positives = 125/160 (78%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 481 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 539

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKASQEADNVLIIQDKRLTAVRG 340
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAKASQEADNVLI+QD++L    G
Sbjct: 540 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPG 599

Query: 339 KKFLQVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLE 220
           K++LQV+KNR+ GD+G+ PL+F+K+SL++    KNK +L+
Sbjct: 600 KRYLQVSKNRFDGDVGVFPLEFNKNSLTFSIPPKNKARLK 639


>BC013349-1|AAH13349.1|  451|Homo sapiens PEO1 protein protein.
          Length = 451

 Score =  128 bits (309), Expect = 3e-29
 Identities = 56/101 (55%), Positives = 76/101 (75%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 350 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 408

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKAS 397
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAK S
Sbjct: 409 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKVS 449


>AL133215-10|CAI10924.1|  582|Homo sapiens progressive external
           ophthalmoplegia 1 protein.
          Length = 582

 Score =  128 bits (309), Expect = 3e-29
 Identities = 56/101 (55%), Positives = 76/101 (75%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 481 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 539

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKAS 397
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAK S
Sbjct: 540 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKVS 580


>AF292005-1|AAK69559.1|  582|Homo sapiens truncated putative T7-like
           mitochondrial DNA helicase protein.
          Length = 582

 Score =  128 bits (309), Expect = 3e-29
 Identities = 56/101 (55%), Positives = 76/101 (75%)
 Frame = -1

Query: 699 LPIYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLGEDRDGDRYLRQDAVI 520
           LP+Y++ FHGQQ I+ V++ ++HA Y++DI HV++DN+QFM+G  E    DR   QD +I
Sbjct: 481 LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMG-HEQLSTDRIAAQDYII 539

Query: 519 AAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKAS 397
             FR FAT  +CHVTLV+HPRKE D ++L T+SIFGSAK S
Sbjct: 540 GVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKVS 580


>BC062215-1|AAH62215.1|  105|Homo sapiens CLSPN protein protein.
          Length = 105

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 273 DKDSLSYQAKK-KNKIKLEDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSDNK 97
           D D   + +KK KN+  L+DS+   ++  A PE+   D  E+  +  + + K KK+   K
Sbjct: 45  DSDEEIFVSKKLKNRKVLQDSDSETEDTNASPEKTTYDSAEEENKENLYAGKKKKKKKKK 104

Query: 96  E 94
           +
Sbjct: 105 K 105


>U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility protein
           protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 243 KKNKIKLEDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSDNKEIDRFL 79
           KK   KLE+    LD+E A  ++N     +K         K + QS+N +ID  +
Sbjct: 264 KKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVI 318


>BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility gene
           101 protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 243 KKNKIKLEDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSDNKEIDRFL 79
           KK   KLE+    LD+E A  ++N     +K         K + QS+N +ID  +
Sbjct: 264 KKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVI 318


>AJ242976-1|CAB45133.1|  380|Homo sapiens p241 protein protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 13/58 (22%), Positives = 29/58 (50%)
 Frame = -1

Query: 276 FDKDSLSYQAKKKNKIKLEDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSD 103
           +++ S S   +KK     E+ ++  D + +  ++NY    EK P   MP +  +++ +
Sbjct: 116 YERSSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEE 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,509,139
Number of Sequences: 237096
Number of extensions: 1837498
Number of successful extensions: 4096
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4080
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)