Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D12
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical pr...    87   2e-17
U50066-1|AAA93437.2|  378|Caenorhabditis elegans Resistance to i...    30   1.8  
AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z71264-4|CAA95831.1|  348|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U97552-5|AAQ01520.1|  605|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical pr...    28   7.3  
L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans chrom...    28   9.7  

>U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical
           protein F46G11.1 protein.
          Length = 618

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
 Frame = -1

Query: 669 QQPIKVVMEAVEHARYMHDIAHVVVDNVQFMLGLG----EDRDG-DRYLRQDAVIAAFRT 505
           ++ I  ++ A+        I HVV+DN+QF++  G    E   G DR+  QD  +   R 
Sbjct: 440 EKSINEIVRAIRIHVENSGIQHVVIDNLQFLINQGMMADEKSSGLDRFHLQDRFVGYMRQ 499

Query: 504 FATARHCHVTLVMHPRKERDSEDLSTSSIFGSAKASQEADNVLIIQDKRLTAVRGK--KF 331
            AT    H+T+V+HPRK     ++      GSA+ +QEADNV+ IQ KR    R K  KF
Sbjct: 500 LATQNQIHITMVVHPRKTDGDTEIDVQHFGGSARVTQEADNVIAIQRKRDDRDRSKFRKF 559

Query: 330 LQVAKNRYSG 301
           L + KNRY G
Sbjct: 560 LYILKNRYYG 569


>U50066-1|AAA93437.2|  378|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 3 protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/77 (25%), Positives = 30/77 (38%)
 Frame = -1

Query: 330 LQVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLEDSEKVLDEEYAVPEQNYIDFNEK 151
           L     +Y  DL +   +F   S  Y   K  K+K +DS    DEE      + +   E+
Sbjct: 241 LTETNEQYIKDLEVALKEFQSLSKEYDKAKMKKLKRKDSSSDEDEEDEEENSSELSEIEE 300

Query: 150 PPRRGMPSRKFKKQSDN 100
                 P +K K  S +
Sbjct: 301 EEEEVKPVKKSKSSSQS 317


>AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical
           protein W07E6.1 protein.
          Length = 664

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -1

Query: 294 GIVPLDFDKDSLSYQAKKKNKIKLEDSEKVLDEEYAVPEQNYIDFN-EKPPRRGMPSRKF 118
           G++  + +K +   Q  KKNK + E SE   DEE    ++N ++ N +K P +    +K 
Sbjct: 518 GVMEKEKEKAAQKSQ-NKKNKAEAEASESSDDEE---EKKNGVEVNGQKKPAKKQQQKKQ 573

Query: 117 KKQSDNKEID 88
           K   D+ + D
Sbjct: 574 KADGDDSDDD 583


>Z71264-4|CAA95831.1|  348|Caenorhabditis elegans Hypothetical
           protein K07G5.5 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 693 IYYLAFHGQQPIKVVMEAVEHARYMHDIAHVVVDNVQ 583
           IYY   + Q  + +V++     R  HDI+H +  N+Q
Sbjct: 293 IYYTGLNAQVELHIVLDEKLPLRITHDISHDLEKNIQ 329


>U97552-5|AAQ01520.1|  605|Caenorhabditis elegans Hypothetical
           protein W05H7.4a protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 222 EDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSDNKEIDR 85
           ED     D +   P +N   F+E+PPRR   SR F +Q+D+ E+ +
Sbjct: 562 EDDAPGQDMDQRPPRRNR--FDEQPPRRTFRSR-FDQQADHDEMSQ 604


>U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical
           protein W05H7.4e protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 222 EDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSDNKEIDR 85
           ED     D +   P +N   F+E+PPRR   SR F +Q+D+ E+ +
Sbjct: 623 EDDAPGQDMDQRPPRRNR--FDEQPPRRTFRSR-FDQQADHDEMSQ 665


>U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical
           protein W05H7.4b protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 222 EDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFKKQSDNKEIDR 85
           ED     D +   P +N   F+E+PPRR   SR F +Q+D+ E+ +
Sbjct: 620 EDDAPGQDMDQRPPRRNR--FDEQPPRRTFRSR-FDQQADHDEMSQ 662


>Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 327 QVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLEDSE 211
           + AKNR +  LG++ +  DK+  S   KK+  ++ ED E
Sbjct: 308 EAAKNRRNLLLGLIGVQEDKNRPSLAPKKRKLVEEEDEE 346


>Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 327 QVAKNRYSGDLGIVPLDFDKDSLSYQAKKKNKIKLEDSE 211
           + AKNR +  LG++ +  DK+  S   KK+  ++ ED E
Sbjct: 308 EAAKNRRNLLLGLIGVQEDKNRPSLAPKKRKLVEEEDEE 346


>L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans
           chromodomain proteinprotein 1 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 21/74 (28%), Positives = 37/74 (50%)
 Frame = -1

Query: 294 GIVPLDFDKDSLSYQAKKKNKIKLEDSEKVLDEEYAVPEQNYIDFNEKPPRRGMPSRKFK 115
           G +  D D D     A KK+K   ED E+V D+E  VP++   +  E+P      S + +
Sbjct: 120 GDIRPDSDTDEEHSSADKKSKA--EDEEEVEDDEEPVPKKKK-EVQEEPEEE--ESVEGE 174

Query: 114 KQSDNKEIDRFLND 73
            + +++E++    D
Sbjct: 175 DEEESQEVEDLKED 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,724,548
Number of Sequences: 27780
Number of extensions: 299883
Number of successful extensions: 1007
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)