Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D07
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0310 - 28376378-28376607,28376789-28376897                       31   0.79 
11_01_0738 - 6218730-6220173,6221969-6223056                           31   1.4  
01_04_0095 + 15979884-15980234                                         31   1.4  
01_01_0118 - 871481-872606,872795-872950,873051-873817                 31   1.4  
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464...    30   1.8  
02_01_0182 + 1245577-1245670,1245928-1246017,1246258-1246290,124...    30   2.4  
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960...    29   3.2  
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77...    29   3.2  
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817           28   9.8  
06_01_0875 + 6707483-6709394,6709750-6709829,6710077-6710174,671...    28   9.8  
02_01_0315 - 2111095-2111241,2111496-2111579,2111803-2111883,211...    28   9.8  
01_01_0115 - 856957-858055,858479-858538,858802-859583                 28   9.8  

>01_06_0310 - 28376378-28376607,28376789-28376897
          Length = 112

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -3

Query: 474 NLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHA 313
           +L + A+     H  AA P R+      ++   W E   GY+ VY+    +L A
Sbjct: 6   SLLAAAAADDARHAQAAGPRRDDDHKAWLLRRAWHEAREGYVVVYDGGGNELSA 59


>11_01_0738 - 6218730-6220173,6221969-6223056
          Length = 843

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -1

Query: 380 QDGKRVTPVTWRCTTRPGRISTRISLLYPPCPGR*QFKTSRQPSNLSPT 234
           +DGK    V   C   P  +   I++LY  CP R    TS+ PSN + T
Sbjct: 312 RDGKHTAYVA--CLVAP--VVAYIAILYIACPSRSPSSTSKSPSNTNTT 356


>01_04_0095 + 15979884-15980234
          Length = 116

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = -2

Query: 337 PVPAGSPRESHCCTLRARDDNNSKRLANRQTCH-QLYEELSAGRGRAGPC 191
           P P  SP  S CC  R+R    S  L      H +L E +  G   AG C
Sbjct: 33  PCPGASPMASPCCRTRSRARTGSTSLGAVAHRHVELREGVGHGGDEAGAC 82


>01_01_0118 - 871481-872606,872795-872950,873051-873817
          Length = 682

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 286 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 432
           G GGY S  +  +LPG  +H  +  +  + +C  +E++    T GR  H
Sbjct: 366 GQGGYGSVYKGVLLPGD-LHVAIKILNGYSNCNGEEFISEVATIGRIHH 413


>08_02_0502 +
           17844775-17845092,17845528-17845634,17846039-17846492,
           17846623-17846694,17846804-17846925,17847079-17847294,
           17847392-17847500,17847618-17847730,17847916-17848063,
           17848274-17848396
          Length = 593

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 226 LRIVGDKFDGWRDVLNCYRPGHGGYSSEIRVEILPGRVVHRHVTG 360
           + +VGD    W+D + C   G   Y +EIR+    G+  ++ + G
Sbjct: 470 VELVGDFTSNWKDKVKCDHKGGSRYEAEIRLR--HGKYYYKFIAG 512


>02_01_0182 +
           1245577-1245670,1245928-1246017,1246258-1246290,
           1246451-1246483,1246657-1246689,1246872-1246904,
           1247073-1247105,1247237-1247286
          Length = 132

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 452 NDASLRRFTRSKREVSFSSAESCFIFNKGAAGRSIAN 562
           N  SL+    SKR + F SA SC IF  G +G +  N
Sbjct: 34  NIFSLKYTPFSKRGLKFGSASSCPIFGSGRSGYNSVN 70


>03_02_0579 -
           9606317-9606892,9607571-9607799,9607902-9608011,
           9608898-9609275,9609380-9609658,9610044-9610168,
           9610269-9610335,9610582-9612006
          Length = 1062

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 516 LSADENDTSLLDLVNLRSDASLSHGEH-HVAAAPARNASENVLI 388
           LS DEN   +  +  + +DAS++H EH +VA      A+  VL+
Sbjct: 435 LSMDENLQMIAKIAAVCNDASIAHSEHQYVATGMPTEAALKVLV 478


>01_01_0103 -
           773727-774737,774797-774813,774852-775078,777465-778237
          Length = 675

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +1

Query: 277 YRPGHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 432
           Y  G GGY S  +   LPG  VH  +  +    +C  ++++    T GR  H
Sbjct: 352 YSQGQGGYGSVYKGVFLPGD-VHVAIKMLDGNSNCNGEDFISEVATIGRIHH 402


>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
          Length = 958

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 327 QDLHANLTAVPSVPGTITIQNVSPTVKL 244
           QD  + ++A PS+PG   +QN + +V L
Sbjct: 558 QDAISQISAAPSLPGATQLQNTTSSVPL 585


>06_01_0875 +
           6707483-6709394,6709750-6709829,6710077-6710174,
           6710704-6710840,6710961-6711301,6711402-6711599
          Length = 921

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 256 WRDVLNCYRPGHGGYSSEIRV--EILPGRVVHRHVTGVTLFPSCTN 387
           W  ++ CY   HG  +  +++  E+   +V+  H+T V+L  +C N
Sbjct: 436 WNALIGCYEH-HGRATKALQLFKEMRRAKVMPTHITFVSLLSACVN 480


>02_01_0315 -
           2111095-2111241,2111496-2111579,2111803-2111883,
           2112133-2112310,2112447-2112623,2112688-2112734,
           2112845-2112901,2113339-2113437,2113696-2113818,
           2113895-2114017,2114241-2114264,2115096-2115209,
           2115315-2115503,2115691-2115857,2116846-2116930,
           2117698-2117778,2118239-2118424,2119266-2119314,
           2119777-2119810,2120087-2120153,2120198-2120419
          Length = 777

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -3

Query: 378 RWKEGHTGYMAVYNPSRQDLHANLTAVPSVPGTITIQNVSPTVKLVTNYTKNYQPAED 205
           + ++ +  +M  YN S+  L      V ++  T  I++  PT+KL   Y KN Q   D
Sbjct: 396 KMQQQNHNHMKGYNGSQ--LWDTAFTVQAILATNLIEDFGPTIKLAHGYIKNSQLLHD 451


>01_01_0115 - 856957-858055,858479-858538,858802-859583
          Length = 646

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 286 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPS-CTNDEYVLACVTRGRGRH 432
           G GGY S  +  +LPG   + HV    L  S C  +E++    T GR  H
Sbjct: 339 GQGGYGSVYKGVLLPG---NAHVAVKVLGNSNCNGEEFISEVSTIGRIHH 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,849,018
Number of Sequences: 37544
Number of extensions: 389922
Number of successful extensions: 1370
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)