Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D07
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82272-2|CAB05216.1| 342|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 29 2.9
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23450-7|AAK31470.3| 170|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 6.7
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 6.7
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 28 8.8
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 28 8.8
>Z82272-2|CAB05216.1| 342|Caenorhabditis elegans Hypothetical
protein F55G11.5 protein.
Length = 342
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 446 CDNDASLRRFTRSKREVSFSSAESCFIFNKGAAGRS 553
C+ +L + RSK+ SFSS S +FN A+G S
Sbjct: 194 CNYVGNLYQMYRSKKPYSFSSEGSIVVFNLAASGNS 229
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 338 TRPGR-ISTRISLLYPPCPGR*QFKTSRQPSNLSPTIRRTISR 213
T+P + I +R+SLL PP P Q K +++ ++ T RRTI++
Sbjct: 320 TKPKKEIKSRVSLLPPPAPKAPQ-KENKEGGEMTETPRRTITK 361
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 338 TRPGR-ISTRISLLYPPCPGR*QFKTSRQPSNLSPTIRRTISR 213
T+P + I +R+SLL PP P Q K +++ ++ T RRTI++
Sbjct: 388 TKPKKEIKSRVSLLPPPAPKAPQ-KENKEGGEMTETPRRTITK 429
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 384 CARWKEGHTGYMAVYNPSRQDLHANLTAVPSVPGTITIQNVSPTVKLVTNYTKNYQ 217
CAR HT ++ +PSR+ + L A S GT + ++ T + V YT YQ
Sbjct: 115 CARRFRTHTDFVNAVHPSRRGV--TLVASASDDGTCRVHDMR-TKEPVKTYTNRYQ 167
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 3.8
Identities = 43/195 (22%), Positives = 76/195 (38%), Gaps = 17/195 (8%)
Frame = -3
Query: 663 TEDANALASRINKTLGSWPILQLTDTNDDRELASFAMLLPAAPLLNIKQLSADEND--TS 490
T+ + + + N+ + +Q D N AS + AP + ++ EN T
Sbjct: 952 TDSDDEDSEKSNRDMSYRTAIQSFDQNSQSASASSSKSTTTAPSNSEMRIEITENPLHTY 1011
Query: 489 LLDL-VNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYN-------- 337
+ L + +S AS S H +++ + A+ +L + G V N
Sbjct: 1012 ITPLRIEKKSSASSSSSSHQPSSSIEKQAARRLLQPISTTHNIRYGVATVENSSQDPTRP 1071
Query: 336 PSRQD------LHANLTAVPSVPGTITIQNVSPTVKLVTNYTKNYQPAEDVLVPAKSTVV 175
PS D LH L A + + T +SP + V + + + L+P + +
Sbjct: 1072 PSTDDSLGDPALHEPLWANLNPHSSYTSAMMSPIMNEVMSNDETTDDEKGRLIPDRPPIP 1131
Query: 174 VSYVPIKHEKREKDE 130
S +K KREKD+
Sbjct: 1132 HSPRELKRLKREKDQ 1146
>U23450-7|AAK31470.3| 170|Caenorhabditis elegans Hypothetical
protein C30B5.6 protein.
Length = 170
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 309 LTAVPSVPGTITIQNVSPTVKLVTNYTKNYQPAEDVLVPAKSTVVVSYVPI 157
LT +PS + T + + +V+ K D+ VP K+ + VS PI
Sbjct: 89 LTTLPSTTQSTTTRTTTQPSTIVSTRQKYVNVDGDIYVPGKTVISVSSTPI 139
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/109 (23%), Positives = 44/109 (40%)
Frame = -3
Query: 525 IKQLSADENDTSLLDLVNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMA 346
+KQ S + L +RS S SH H A++ + V+ ++G++
Sbjct: 1441 VKQKSQSIAVSPLARDTRMRSP-SPSHLHHRPASSSYTTRPDGVVTPATSSSPNNSGFVQ 1499
Query: 345 VYNPSRQDLHANLTAVPSVPGTITIQNVSPTVKLVTNYTKNYQPAEDVL 199
SRQ + + P T T V PT + ++ Q A+D+L
Sbjct: 1500 DLISSRQSPNLSARRRSYQPTTTTSMIVPPTTHHLRGFSAAAQSAQDLL 1548
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/109 (23%), Positives = 44/109 (40%)
Frame = -3
Query: 525 IKQLSADENDTSLLDLVNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMA 346
+KQ S + L +RS S SH H A++ + V+ ++G++
Sbjct: 1441 VKQKSQSIAVSPLARDTRMRSP-SPSHLHHRPASSSYTTRPDGVVTPATSSSPNNSGFVQ 1499
Query: 345 VYNPSRQDLHANLTAVPSVPGTITIQNVSPTVKLVTNYTKNYQPAEDVL 199
SRQ + + P T T V PT + ++ Q A+D+L
Sbjct: 1500 DLISSRQSPNLSARRRSYQPTTTTSMIVPPTTHHLRGFSAAAQSAQDLL 1548
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 345 VYNPSRQDLHANLTAVPSVPGTITIQNVS-PTVKLVTNYTKNYQPAEDVLVPAKSTVVVS 169
V PS+ ++ A T+ ++ T + + PT +++ + AEDV+VPA + VS
Sbjct: 13 VTEPSKMEMQAESTSHITIRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVS 72
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 345 VYNPSRQDLHANLTAVPSVPGTITIQNVS-PTVKLVTNYTKNYQPAEDVLVPAKSTVVVS 169
V PS+ ++ A T+ ++ T + + PT +++ + AEDV+VPA + VS
Sbjct: 13 VTEPSKMEMQAESTSHITIRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVS 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,921
Number of Sequences: 27780
Number of extensions: 317468
Number of successful extensions: 1025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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