Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D06
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0249 - 10946993-10947073,10947307-10947432,10948497-109485... 33 0.30
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 31 0.91
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 31 1.2
02_04_0226 + 21073967-21074179,21074711-21074832,21074926-210753... 31 1.2
02_02_0677 + 12859101-12859413,12862450-12862817 29 6.4
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 29 6.4
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879... 28 8.5
02_05_0548 + 29896648-29896701,29896818-29897021,29897451-298977... 28 8.5
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 28 8.5
01_01_0473 - 3478660-3480338,3480507-3480609 28 8.5
>05_03_0249 -
10946993-10947073,10947307-10947432,10948497-10948552,
10949066-10949338,10951434-10951716
Length = 272
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2
Query: 448 KRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVR 320
+ ++ ME V L+EAK G++ + ++YQ E+ R+ E V+
Sbjct: 115 RTMKKNMEAVTKQSRTLEEAKHGSVEEIQQYQKEISRLNEQVQ 157
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 31.5 bits (68), Expect = 0.91
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = -2
Query: 472 RCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKE 329
R E +LEK+L ER KA E +KEA + ++ +RYQ E++R+++
Sbjct: 119 RKEREELEKKLEE--ERKKAEEAQMKEAMEQQQKELERYQ-ELERLQK 163
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/87 (22%), Positives = 45/87 (51%)
Frame = -2
Query: 535 ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 356
EN+ E+ ++ +L + ++L ++ + + +++ A + +KE DGA +
Sbjct: 464 ENSREETERLRSKLTQVRSELEPWENQIIEH-KGSLDVASAEKKLMKEKHDGARAELTAA 522
Query: 355 QFEVDRIKEAVRAKNLARRGPQAQIAK 275
Q +++ IKE ++AK+ Q +I K
Sbjct: 523 QNQMESIKEQIKAKDTYIMELQEKIEK 549
>02_04_0226 +
21073967-21074179,21074711-21074832,21074926-21075370,
21075453-21075559,21075656-21076463,21076691-21077128,
21077349-21077537,21077616-21077843,21077943-21078140,
21078304-21078379,21078452-21078593,21078749-21079238
Length = 1151
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = -2
Query: 583 RRKAVPLHKNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALET 404
R+ + P +++ RS + L +LT+ H + +N+ V + K LR TME +KAL+T
Sbjct: 798 RKLSSPAKEDEMKRSHDKLLGELTE-HSEC--NNSGSNSFVIAVIKGLRFTMEELKALKT 854
Query: 403 ALKEAK 386
+ A+
Sbjct: 855 EVSRAR 860
>02_02_0677 + 12859101-12859413,12862450-12862817
Length = 226
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 442 LRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNL 308
L+ +E V L+EAK G + K+YQ E+ + E ++ L
Sbjct: 127 LKKNVEAVTKHNKMLEEAKHGRSEETKKYQEEIGALNEDMKKLKL 171
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 595 KRAPRRKAVPLHKNK-RSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERV 419
KRA A L + S ++ L +++KVH+ +++ ++ + EKRL ++
Sbjct: 316 KRAKDEAAKDLQSVRMESEKSKSELAEISKVHQAKLKEEEEISKSIMDREKRLSILYQKQ 375
Query: 418 -KALETALKEAKD 383
+A + A K A+D
Sbjct: 376 GRATQFANKAARD 388
>03_05_0223 -
22087076-22087340,22087448-22087726,22087808-22087950,
22088029-22088133,22088272-22088465,22088561-22088753,
22088893-22089202,22089335-22089558,22089862-22089990,
22090019-22090078,22090426-22090617,22091463-22091522,
22091606-22091688,22092473-22092611,22092949-22093083,
22093187-22093462
Length = 928
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 424 RVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLARR 299
++K ++ LK K GAMR+ ++ + + +KE R K R
Sbjct: 856 QMKKMKKRLKSEKKGAMRELRKDNYFLSAVKEKERIKQEQER 897
>02_05_0548 +
29896648-29896701,29896818-29897021,29897451-29897708,
29897821-29898036,29898130-29898285,29898396-29898707,
29898795-29898882,29899055-29899203,29899390-29899722
Length = 589
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/72 (22%), Positives = 40/72 (55%)
Frame = -2
Query: 526 LEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFE 347
LEQL K K+ +++ A+++ + ++ + T+E + AL + + + RK +F+
Sbjct: 105 LEQLGKKKKERIKELANIQSRIEQIRGEIAGTLE--MGQQVALPQINEDDLTVRKLREFQ 162
Query: 346 VDRIKEAVRAKN 311
+ +++E + K+
Sbjct: 163 L-QLQELEKEKS 173
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 502 KQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKD 383
KQL + + R E+ LEK + + K LET + E KD
Sbjct: 2251 KQLSVELENARMEIHNLEKHSEMLLNQKKNLETQVSELKD 2290
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -2
Query: 568 PLHKNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALK 395
P N+R E+ L++ + + L N RC+ KLE++L+ + + +L+ L+
Sbjct: 186 PFALNERIAELEDELQEAREKLEALEEKNT--RCQCEKLEEKLKDSHSEISSLQKELE 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,040,225
Number of Sequences: 37544
Number of extensions: 288289
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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