Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D06
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 117 1e-26
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 117 1e-26
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 117 1e-26
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 33 0.27
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 33 0.27
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 32 0.47
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 32 0.47
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 32 0.47
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 32 0.47
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 32 0.47
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 31 0.81
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 31 0.81
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 30 1.9
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 30 1.9
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 30 1.9
AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical... 30 1.9
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 3.3
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 4.3
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 4.3
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 4.3
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 4.3
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 4.3
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 4.3
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 29 4.3
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 29 4.3
AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical ... 29 4.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 4.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 4.3
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical pr... 29 5.7
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 28 7.6
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 28 7.6
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 28 7.6
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 28 7.6
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 28 7.6
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 117 bits (282), Expect = 1e-26
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = -2
Query: 559 KNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDG 380
+ +R + ENNL++LTKVHKQLVRDNADLR E+PK+E RLR +R+K LETAL+++K
Sbjct: 697 QKQRIQFLENNLDKLTKVHKQLVRDNADLRVELPKMEARLRGREDRIKILETALRDSKQR 756
Query: 379 AMRDRKRYQFEVDRIKEAVRAKNLARRGPQAQIAKPIR 266
+ +RK+YQ EV+RIKEAVR +N+ RR QI KPIR
Sbjct: 757 SQAERKKYQQEVERIKEAVRQRNM-RRMNAPQIVKPIR 793
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 117 bits (282), Expect = 1e-26
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = -2
Query: 559 KNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDG 380
+ +R + ENNL++LTKVHKQLVRDNADLR E+PK+E RLR +R+K LETAL+++K
Sbjct: 697 QKQRIQFLENNLDKLTKVHKQLVRDNADLRVELPKMEARLRGREDRIKILETALRDSKQR 756
Query: 379 AMRDRKRYQFEVDRIKEAVRAKNLARRGPQAQIAKPIR 266
+ +RK+YQ EV+RIKEAVR +N+ RR QI KPIR
Sbjct: 757 SQAERKKYQQEVERIKEAVRQRNM-RRMNAPQIVKPIR 793
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 117 bits (282), Expect = 1e-26
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = -2
Query: 559 KNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDG 380
+ +R + ENNL++LTKVHKQLVRDNADLR E+PK+E RLR +R+K LETAL+++K
Sbjct: 697 QKQRIQFLENNLDKLTKVHKQLVRDNADLRVELPKMEARLRGREDRIKILETALRDSKQR 756
Query: 379 AMRDRKRYQFEVDRIKEAVRAKNLARRGPQAQIAKPIR 266
+ +RK+YQ EV+RIKEAVR +N+ RR QI KPIR
Sbjct: 757 SQAERKKYQQEVERIKEAVRQRNM-RRMNAPQIVKPIR 793
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = -2
Query: 457 KLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLAR 302
KLE++++ + VK E ALK A+ GA ++++ Q + DR+KE ++ ++R
Sbjct: 623 KLEQKIKDKKKEVKEAEAALKSAR-GA--EKEKAQKKYDRLKEQLKKLKISR 671
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = -2
Query: 457 KLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLAR 302
KLE++++ + VK E ALK A+ GA ++++ Q + DR+KE ++ ++R
Sbjct: 695 KLEQKIKDKKKEVKEAEAALKSAR-GA--EKEKAQKKYDRLKEQLKKLKISR 743
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = -2
Query: 457 KLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLAR 302
KLE++++ + VK E ALK A+ GA ++++ Q + DR+KE ++ ++R
Sbjct: 695 KLEQKIKDKKKEVKEAEAALKSAR-GA--EKEKAQKKYDRLKEQLKKLKISR 743
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = -2
Query: 544 RSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDR 365
+ E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR
Sbjct: 817 KECEARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DR 873
Query: 364 KRYQFEVDRIKEA 326
+ E +R++ +
Sbjct: 874 AEWSNERNRLESS 886
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = -2
Query: 544 RSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDR 365
+ E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR
Sbjct: 817 KECEARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DR 873
Query: 364 KRYQFEVDRIKEA 326
+ E +R++ +
Sbjct: 874 AEWSNERNRLESS 886
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = -2
Query: 544 RSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDR 365
+ E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR
Sbjct: 577 KECEARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DR 633
Query: 364 KRYQFEVDRIKEA 326
+ E +R++ +
Sbjct: 634 AEWSNERNRLESS 646
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = -2
Query: 544 RSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDR 365
+ E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR
Sbjct: 817 KECEARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DR 873
Query: 364 KRYQFEVDRIKEA 326
+ E +R++ +
Sbjct: 874 AEWSNERNRLESS 886
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/91 (21%), Positives = 43/91 (47%)
Frame = -2
Query: 553 KRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAM 374
KRS + +LTK + NA+ + ++EK L+ ++K +A K+ +
Sbjct: 225 KRSPTKLRRRSRLTKAQLETAIKNAEKEARIAEMEKILKRRKAQLKERRSARKQRELAMK 284
Query: 373 RDRKRYQFEVDRIKEAVRAKNLARRGPQAQI 281
+ R+ + + +I++ R+ RR P ++
Sbjct: 285 KRRESRKLRITKIQDDSRS---VRRSPVGRV 312
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 326 GFLDSVHFELVSFAIAHCTVFCFLERC-LECLDTFHGGSESFLQLGHF 466
G LD HF F +AHC + RC ++ L F ++LQ F
Sbjct: 782 GVLDKAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQFHGF 829
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 326 GFLDSVHFELVSFAIAHCTVFCFLERC-LECLDTFHGGSESFLQLGHF 466
G LD HF F +AHC + RC ++ L F ++LQ F
Sbjct: 782 GVLDKAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQFHGF 829
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 326 GFLDSVHFELVSFAIAHCTVFCFLERC-LECLDTFHGGSESFLQLGHF 466
G LD HF F +AHC + RC ++ L F ++LQ F
Sbjct: 782 GVLDKAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQFHGF 829
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 451 EKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIK 332
EKRL A +++ A K+ D A+ DR+R Q E D +K
Sbjct: 167 EKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLK 206
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 451 EKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIK 332
EKRL A +++ A K+ D A+ DR+R Q E D +K
Sbjct: 167 EKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLK 206
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 451 EKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIK 332
EKRL A +++ A K+ D A+ DR+R Q E D +K
Sbjct: 167 EKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLK 206
>AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical
protein Y111B2A.26 protein.
Length = 371
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = -2
Query: 547 SRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRD 368
+ + E +++L ++ + L+ E + E+R RV+ LET + ++GA
Sbjct: 30 NEAHEKKVKELQRLREHLMIVEETSTREAVEAEQRETELRARVRELETKGHQVEEGASES 89
Query: 367 RKRYQFEVDRIKEAVRA 317
++YQ ++ + V +
Sbjct: 90 TQQYQVQIASLTSQVES 106
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Frame = -2
Query: 541 SXENNL--EQLTKVHKQLVRDNADLRCEVPKLEKRLR--------ATMERVKALETALKE 392
S EN L +Q+ +++ + + AD E+ K K + A R+K LET L++
Sbjct: 213 SSENALLRQQVIELNSSVEKMKADYESEILKYTKEAKTAGLKAKVAATARIKELETTLED 272
Query: 391 AKDGAMRDRKRYQFEVDRIKEA 326
+R R Q EVD ++ +
Sbjct: 273 INGKYEDERDRLQEEVDTLRSS 294
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 11/108 (10%)
Frame = -2
Query: 592 RAPRRKAVPLHKNKRS---RSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMER 422
R +A L K KR + + NLE++ K ++ + + LEK R E+
Sbjct: 277 RQAEARAEALEKEKREQEEKQKKENLERVEKERREHIERHRQAEARAKALEKEKRELEEK 336
Query: 421 VKA--LETALKEAKDGAMRDR------KRYQFEVDRIKEAVRAKNLAR 302
K LE KE ++ R R K + E ++E + +NL R
Sbjct: 337 QKKENLERVEKERREHIERHRQAEARAKALEKEKRELEEKQKKENLER 384
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = -2
Query: 592 RAPRRKAVPLHKNKRS---RSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMER 422
R +A L K KR + + NLE++ K ++ + + LEK R E+
Sbjct: 317 RQAEARAKALEKEKRELEEKQKKENLERVEKERREHIERHRQAEARAKALEKEKRELEEK 376
Query: 421 VKA--LETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKN 311
K LE A ++ ++ R R+ Q +R+ +A+ AK+
Sbjct: 377 QKKENLERATQKEREHIERHREA-QERHERL-QALEAKD 413
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 520 QLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVK-ALETALKEAKDGA 377
+ T +L DN+DL +V +LE L AT+ R K A + L EAK A
Sbjct: 1279 EYTSTKGRLSNDNSDLARQVEELEIHL-ATINRAKTAFSSQLVEAKKAA 1326
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 520 QLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVK-ALETALKEAKDGA 377
+ T +L DN+DL +V +LE L AT+ R K A + L EAK A
Sbjct: 1279 EYTSTKGRLSNDNSDLARQVEELEIHL-ATINRAKTAFSSQLVEAKKAA 1326
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 553 KRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGA 377
K + + LEQLT++ ++L + ++ +PK K L + E+V+ +E E
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 376 MRDRKRYQFEVDRIKEAVRAKNLARRG 296
R + + +E N A G
Sbjct: 2604 EETRAKISEIAGKAEEITEKANSAMEG 2630
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 553 KRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGA 377
K + + LEQLT++ ++L + ++ +PK K L + E+V+ +E E
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 376 MRDRKRYQFEVDRIKEAVRAKNLARRG 296
R + + +E N A G
Sbjct: 2604 EETRAKISEIAGKAEEITEKANSAMEG 2630
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 520 QLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVK-ALETALKEAKDGA 377
+ T +L DN+DL +V +LE L AT+ R K A + L EAK A
Sbjct: 1279 EYTSTKGRLSNDNSDLARQVEELEIHL-ATINRAKTAFSSQLVEAKKAA 1326
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -2
Query: 562 HKNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLR-------ATMERVKALET 404
H N + +++L + + L+R+N L+ EV L+ + R +T R++ ET
Sbjct: 652 HTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKET 711
Query: 403 ALKEAKDGAMRDRKRYQFEVDRIKE 329
++ + D R+ Q ++D ++E
Sbjct: 712 QIRYSDD----IRRNIQKDLDDLRE 732
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -2
Query: 562 HKNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLR-------ATMERVKALET 404
H N + +++L + + L+R+N L+ EV L+ + R +T R++ ET
Sbjct: 725 HTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKET 784
Query: 403 ALKEAKDGAMRDRKRYQFEVDRIKE 329
++ + D R+ Q ++D ++E
Sbjct: 785 QIRYSDD----IRRNIQKDLDDLRE 805
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -2
Query: 562 HKNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLR-------ATMERVKALET 404
H N + +++L + + L+R+N L+ EV L+ + R +T R++ ET
Sbjct: 725 HTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKET 784
Query: 403 ALKEAKDGAMRDRKRYQFEVDRIKE 329
++ + D R+ Q ++D ++E
Sbjct: 785 QIRYSDD----IRRNIQKDLDDLRE 805
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 563 QGNRLPPRRPL-QNCSXSLSSPAGLEQXFTQXVQGSVVP*PRVFSKPLXISASLFTP 730
QG R P P S SSP L T GSV+P VF S +F P
Sbjct: 140 QGQRSSPSSPTGSETVVSTSSPPELSSESTPNTSGSVIPTSPVFKPNGYSSMPMFNP 196
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = -2
Query: 523 EQLTK-VHKQ---LVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 356
EQ TK +H++ L R AD+RCE+ LE R + +E L+ L++ +D A+ D ++
Sbjct: 323 EQATKYLHEENMKLTRQKADIRCEL--LEARRK--VEGFDKLKQELEKERDDALADVQKI 378
Query: 355 QFEVDR 338
+ EV R
Sbjct: 379 R-EVKR 383
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 553 KRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGA 377
K + + LEQLT++ ++L + ++ +PK K L + E+V+ +E E
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 376 MRDRKRYQFEVDRIKEAVRAKNLARRG 296
R + + +E N A G
Sbjct: 418 EETRAKISEIAGKAEEITEKANSAMEG 444
>AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical
protein Y59C2A.3 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 448 KRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLARRGPQAQI 281
K RA +R + L + E A+ R+R + VD EAVR KN A++ A+I
Sbjct: 195 KEKRAAADRARYLR--MSEEDRSALNQRRREKHSVDVNLEAVREKN-AKKAEAARI 247
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 553 KRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGA 377
K + + LEQLT++ ++L + ++ +PK K L + E+V+ +E E
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 376 MRDRKRYQFEVDRIKEAVRAKNLARRG 296
R + + +E N A G
Sbjct: 2604 EETRAKISEIAGKAEEITEKANSAMEG 2630
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 553 KRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGA 377
K + + LEQLT++ ++L + ++ +PK K L + E+V+ +E E
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 376 MRDRKRYQFEVDRIKEAVRAKNLARRG 296
R + + +E N A G
Sbjct: 2604 EETRAKISEIAGKAEEITEKANSAMEG 2630
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -2
Query: 589 APRRKAVPLHKNKRSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKAL 410
A R A +H+ + E + + K+ KQL + N +V ++E++ R +E +
Sbjct: 66 AERNAAEEIHRKSVEKFNEEHKTYMAKLEKQLEKINEKGEQDVKEVEQQ-RVKLEEQRT- 123
Query: 409 ETALKEAKDGAMRDRKRY-QFEVDRIKE 329
E +K + A K+Y + E R+++
Sbjct: 124 EDLVKHHESMANLSEKKYKEIEKQRVEQ 151
>Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical
protein R11A5.2 protein.
Length = 293
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 604 TILKRAPRRKAVPLHKNKRSRSXENNLE-QLTKVHKQLVRDNADLRCEVPKLEKRLRATM 428
T LK+A R + R++ +++ Q +V +QL R+N+ L + +R+R
Sbjct: 50 TQLKKAETRVQQMTTEQIRNKDRQDDSRVQFAQVEEQLRRENSHLHEQCESQRERIRKLE 109
Query: 427 ERVKALETA 401
+R LET+
Sbjct: 110 QRNDVLETS 118
>Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = -2
Query: 532 NNLEQLTKVHKQLVRDN-----ADL--RCEVPKLEKRLRATMERVKALETALKEAKDGAM 374
N L Q+ +QL+ D ADL RC VP +EKR ER + L + +D +
Sbjct: 145 NTLYQVDNPDRQLICDRISDVYADLYGRCYVPHVEKRQAKIKERCNGISAPLLKFQDFFL 204
Query: 373 R 371
R
Sbjct: 205 R 205
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -2
Query: 523 EQLTK-VHKQ---LVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMR 371
EQ TK +H + L R AD+RC++ + + L+ E+ + LE EA + R
Sbjct: 315 EQATKYLHAENMKLTRQKADIRCDLLEARRNLKGFDEKREELEKQRDEALEDVRR 369
>Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = -2
Query: 532 NNLEQLTKVHKQLVRDN-----ADL--RCEVPKLEKRLRATMERVKALETALKEAKDGAM 374
N L Q+ +QL+ D ADL RC VP +EKR ER + L + +D +
Sbjct: 145 NTLYQVDNPDRQLICDRISDVYADLYGRCYVPHVEKRQAKIKERCNGISAPLLKFQDFFL 204
Query: 373 R 371
R
Sbjct: 205 R 205
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -2
Query: 466 EVPKLEKRLRATMERVKALETALKE 392
E+P LE LRA +E++KA E ALK+
Sbjct: 158 EIPNLENDLRAEVEKLKA-ELALKD 181
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 RSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKAL-ETALKEAKDGAM 374
+S ++N +Q+ +H ++ +NA LR LE+R + + + E KE K+
Sbjct: 354 QSEETKDNHKQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACVNENWAKELKEKQQ 413
Query: 373 R-DRKRYQFE 347
D+ +Y E
Sbjct: 414 DWDKVKYAAE 423
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 RSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKAL-ETALKEAKDGAM 374
+S ++N +Q+ +H ++ +NA LR LE+R + + + E KE K+
Sbjct: 354 QSEETKDNHKQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACVNENWAKELKEKQQ 413
Query: 373 R-DRKRYQFE 347
D+ +Y E
Sbjct: 414 DWDKVKYAAE 423
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 RSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKAL-ETALKEAKDGAM 374
+S ++N +Q+ +H ++ +NA LR LE+R + + + E KE K+
Sbjct: 354 QSEETKDNHKQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACVNENWAKELKEKQQ 413
Query: 373 R-DRKRYQFE 347
D+ +Y E
Sbjct: 414 DWDKVKYAAE 423
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 RSRSXENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKAL-ETALKEAKDGAM 374
+S ++N +Q+ +H ++ +NA LR LE+R + + + E KE K+
Sbjct: 354 QSEETKDNHKQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACVNENWAKELKEKQQ 413
Query: 373 R-DRKRYQFE 347
D+ +Y E
Sbjct: 414 DWDKVKYAAE 423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,114,326
Number of Sequences: 27780
Number of extensions: 240062
Number of successful extensions: 863
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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