Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D04
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07894-1|CAA69202.1|  552|Drosophila melanogaster mitochondrial ...   191   1e-48
BT003592-1|AAO39595.1|  552|Drosophila melanogaster HL08087p pro...   191   1e-48
AE013599-3468|AAF46903.1|  552|Drosophila melanogaster CG3612-PA...   191   1e-48
AJ012576-1|CAA10062.1|  601|Drosophila melanogaster zinc finger ...    30   3.7  
AF181647-1|AAD55433.1|  601|Drosophila melanogaster ken protein.       30   3.7  
AE013599-3711|AAF47084.1|  601|Drosophila melanogaster CG5575-PA...    30   3.7  
AB010261-4|BAA32687.1|  601|Drosophila melanogaster ken protein.       30   3.7  
AB010260-1|BAA32683.1|  601|Drosophila melanogaster ken protein.       30   3.7  

>Y07894-1|CAA69202.1|  552|Drosophila melanogaster mitochondrial ATP
           synthase alphasubunit precursor protein.
          Length = 552

 Score =  191 bits (465), Expect = 1e-48
 Identities = 105/174 (60%), Positives = 120/174 (68%), Gaps = 1/174 (0%)
 Frame = -3

Query: 793 SYIPTXGISITDDRSSXKLSCXTKVSDQPSTSVCLYXXXXXXXXXXXXXXXXXXXSWNWL 614
           +YIPT  ISITD +   +     K   +P+ +V L                        L
Sbjct: 378 AYIPTNVISITDGQIFLETELFYK-GIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLEL 436

Query: 613 ST-REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLD 437
           +  REVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QVA+IYCGVRGHLD
Sbjct: 437 AQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLD 496

Query: 436 KLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 275
           K+DP+KIT FEKEF QHIKTS Q LL TIAKDG I+  SDA LK IV  F++TF
Sbjct: 497 KMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550



 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 47/49 (95%), Positives = 47/49 (95%)
 Frame = -2

Query: 755 QIFXETELXYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 609
           QIF ETEL YKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 391 QIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 439


>BT003592-1|AAO39595.1|  552|Drosophila melanogaster HL08087p
           protein.
          Length = 552

 Score =  191 bits (465), Expect = 1e-48
 Identities = 105/174 (60%), Positives = 120/174 (68%), Gaps = 1/174 (0%)
 Frame = -3

Query: 793 SYIPTXGISITDDRSSXKLSCXTKVSDQPSTSVCLYXXXXXXXXXXXXXXXXXXXSWNWL 614
           +YIPT  ISITD +   +     K   +P+ +V L                        L
Sbjct: 378 AYIPTNVISITDGQIFLETELFYK-GIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLEL 436

Query: 613 ST-REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLD 437
           +  REVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QVA+IYCGVRGHLD
Sbjct: 437 AQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLD 496

Query: 436 KLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 275
           K+DP+KIT FEKEF QHIKTS Q LL TIAKDG I+  SDA LK IV  F++TF
Sbjct: 497 KMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550



 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 47/49 (95%), Positives = 47/49 (95%)
 Frame = -2

Query: 755 QIFXETELXYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 609
           QIF ETEL YKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 391 QIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 439


>AE013599-3468|AAF46903.1|  552|Drosophila melanogaster CG3612-PA
           protein.
          Length = 552

 Score =  191 bits (465), Expect = 1e-48
 Identities = 105/174 (60%), Positives = 120/174 (68%), Gaps = 1/174 (0%)
 Frame = -3

Query: 793 SYIPTXGISITDDRSSXKLSCXTKVSDQPSTSVCLYXXXXXXXXXXXXXXXXXXXSWNWL 614
           +YIPT  ISITD +   +     K   +P+ +V L                        L
Sbjct: 378 AYIPTNVISITDGQIFLETELFYK-GIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLEL 436

Query: 613 ST-REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLD 437
           +  REVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QVA+IYCGVRGHLD
Sbjct: 437 AQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLD 496

Query: 436 KLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 275
           K+DP+KIT FEKEF QHIKTS Q LL TIAKDG I+  SDA LK IV  F++TF
Sbjct: 497 KMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550



 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 47/49 (95%), Positives = 47/49 (95%)
 Frame = -2

Query: 755 QIFXETELXYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 609
           QIF ETEL YKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 391 QIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 439


>AJ012576-1|CAA10062.1|  601|Drosophila melanogaster zinc finger
           protein protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 392 SEFLLEGSDFGGVQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 547
           S  L  GSD  G+ L  VTA  +     LF +SH  ++  L + S  +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342


>AF181647-1|AAD55433.1|  601|Drosophila melanogaster ken protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 392 SEFLLEGSDFGGVQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 547
           S  L  GSD  G+ L  VTA  +     LF +SH  ++  L + S  +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342


>AE013599-3711|AAF47084.1|  601|Drosophila melanogaster CG5575-PA
           protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 392 SEFLLEGSDFGGVQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 547
           S  L  GSD  G+ L  VTA  +     LF +SH  ++  L + S  +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342


>AB010261-4|BAA32687.1|  601|Drosophila melanogaster ken protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 392 SEFLLEGSDFGGVQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 547
           S  L  GSD  G+ L  VTA  +     LF +SH  ++  L + S  +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342


>AB010260-1|BAA32683.1|  601|Drosophila melanogaster ken protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 392 SEFLLEGSDFGGVQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 547
           S  L  GSD  G+ L  VTA  +     LF +SH  ++  L + S  +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,157,776
Number of Sequences: 53049
Number of extensions: 734753
Number of successful extensions: 1887
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)