Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D02
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...    34   0.12 
02_05_0780 - 31705605-31705754,31705858-31706191,31706306-317064...    29   4.4  
12_01_0874 + 8384332-8384657,8385447-8386044                           29   5.8  

>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -1

Query: 632 KNAGEMIDKLTLTFNRT 582
           +NAGEM+D+LTLT+NRT
Sbjct: 331 RNAGEMLDRLTLTYNRT 347


>02_05_0780 -
           31705605-31705754,31705858-31706191,31706306-31706478,
           31706615-31706810,31707864-31708777
          Length = 588

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 563 PGSSSRSSLVRPPWTKPPNAIDAPN 489
           PG+S+RSSL R P  KP N   A N
Sbjct: 168 PGASARSSLERNPANKPANERKATN 192


>12_01_0874 + 8384332-8384657,8385447-8386044
          Length = 307

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 581 PSSCHQPGSSSRSSLVRPPWTKP 513
           PS C++  S+   S  +PPW  P
Sbjct: 70  PSCCYKAASAPEDSATKPPWAMP 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,576,089
Number of Sequences: 37544
Number of extensions: 287563
Number of successful extensions: 756
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)