Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D02
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113454-1|AAM29459.1|  297|Drosophila melanogaster RE35715p pro...    58   1e-08
AE014297-4433|AAN14186.1|  297|Drosophila melanogaster CG7610-PC...    58   1e-08
AE014297-4432|AAF56932.1|  297|Drosophila melanogaster CG7610-PB...    58   1e-08
AE014297-4431|AAN14185.1|  297|Drosophila melanogaster CG7610-PA...    58   1e-08

>AY113454-1|AAM29459.1|  297|Drosophila melanogaster RE35715p
           protein.
          Length = 297

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/78 (41%), Positives = 39/78 (50%)
 Frame = -1

Query: 815 PLYXKKXIEGASKLTAYDXXDXXGXQSYTEFXXXXXXXYALEEGAXFRXXXXXXXXXXXX 636
           P++    +E + KL  YD  D    +SY EF       Y ++EGA               
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNAS 260

Query: 635 PKNAGEMIDKLTLTFNRT 582
            KNAGEMIDKLTLTFNRT
Sbjct: 261 -KNAGEMIDKLTLTFNRT 277



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = -3

Query: 660 RMXAMDNASQERRRDDRQADPHVQQDPVKLSSTRELIEIISGAAAL 523
           RM AMDNAS+       +      +    +  TRELIEIISGAAAL
Sbjct: 252 RMTAMDNASKNAGEMIDKLTLTFNRTRQAVI-TRELIEIISGAAAL 296


>AE014297-4433|AAN14186.1|  297|Drosophila melanogaster CG7610-PC,
           isoform C protein.
          Length = 297

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/78 (41%), Positives = 39/78 (50%)
 Frame = -1

Query: 815 PLYXKKXIEGASKLTAYDXXDXXGXQSYTEFXXXXXXXYALEEGAXFRXXXXXXXXXXXX 636
           P++    +E + KL  YD  D    +SY EF       Y ++EGA               
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNAS 260

Query: 635 PKNAGEMIDKLTLTFNRT 582
            KNAGEMIDKLTLTFNRT
Sbjct: 261 -KNAGEMIDKLTLTFNRT 277



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = -3

Query: 660 RMXAMDNASQERRRDDRQADPHVQQDPVKLSSTRELIEIISGAAAL 523
           RM AMDNAS+       +      +    +  TRELIEIISGAAAL
Sbjct: 252 RMTAMDNASKNAGEMIDKLTLTFNRTRQAVI-TRELIEIISGAAAL 296


>AE014297-4432|AAF56932.1|  297|Drosophila melanogaster CG7610-PB,
           isoform B protein.
          Length = 297

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/78 (41%), Positives = 39/78 (50%)
 Frame = -1

Query: 815 PLYXKKXIEGASKLTAYDXXDXXGXQSYTEFXXXXXXXYALEEGAXFRXXXXXXXXXXXX 636
           P++    +E + KL  YD  D    +SY EF       Y ++EGA               
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNAS 260

Query: 635 PKNAGEMIDKLTLTFNRT 582
            KNAGEMIDKLTLTFNRT
Sbjct: 261 -KNAGEMIDKLTLTFNRT 277



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = -3

Query: 660 RMXAMDNASQERRRDDRQADPHVQQDPVKLSSTRELIEIISGAAAL 523
           RM AMDNAS+       +      +    +  TRELIEIISGAAAL
Sbjct: 252 RMTAMDNASKNAGEMIDKLTLTFNRTRQAVI-TRELIEIISGAAAL 296


>AE014297-4431|AAN14185.1|  297|Drosophila melanogaster CG7610-PA,
           isoform A protein.
          Length = 297

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/78 (41%), Positives = 39/78 (50%)
 Frame = -1

Query: 815 PLYXKKXIEGASKLTAYDXXDXXGXQSYTEFXXXXXXXYALEEGAXFRXXXXXXXXXXXX 636
           P++    +E + KL  YD  D    +SY EF       Y ++EGA               
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNAS 260

Query: 635 PKNAGEMIDKLTLTFNRT 582
            KNAGEMIDKLTLTFNRT
Sbjct: 261 -KNAGEMIDKLTLTFNRT 277



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = -3

Query: 660 RMXAMDNASQERRRDDRQADPHVQQDPVKLSSTRELIEIISGAAAL 523
           RM AMDNAS+       +      +    +  TRELIEIISGAAAL
Sbjct: 252 RMTAMDNASKNAGEMIDKLTLTFNRTRQAVI-TRELIEIISGAAAL 296


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,489,331
Number of Sequences: 53049
Number of extensions: 490687
Number of successful extensions: 1209
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)