Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D01
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1034 - 8962703-8962748,8962831-8962991,8963068-8963905,896...    29   5.4  
02_01_0330 + 2325504-2325739,2326749-2327622                           28   9.4  

>07_01_1034 - 8962703-8962748,8962831-8962991,8963068-8963905,
            8963991-8964128,8964206-8964355,8964436-8964683,
            8964825-8964953,8965735-8965960,8966909-8966975,
            8967488-8967551,8968902-8969000,8969074-8969157,
            8969240-8969321,8969412-8969460,8969664-8969769,
            8970650-8970734,8970814-8970917,8970994-8971109,
            8971187-8971373,8972005-8972113,8972633-8972761,
            8973365-8973449,8973812-8973947,8974078-8974230,
            8974488-8974634,8974801-8974941,8975580-8975903
          Length = 1400

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = -3

Query: 286  WRDIVLMHKQPRNIFVQPNTFHKGDAVEXKRYPATAEGMVASWVDRFPNTKVDDILEKLA 107
            WR IVL+H  P  I V+   F+K    E      T EG   +  D+    K +D   K+A
Sbjct: 1245 WRVIVLLHSHP--ILVKVYLFNKKKDKEGNGGGKTKEGNGENSKDQKGGEKTNDADYKMA 1302

Query: 106  K 104
            K
Sbjct: 1303 K 1303


>02_01_0330 + 2325504-2325739,2326749-2327622
          Length = 369

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/60 (20%), Positives = 24/60 (40%)
 Frame = -3

Query: 298 PWGRWRDIVLMHKQPRNIFVQPNTFHKGDAVEXKRYPATAEGMVASWVDRFPNTKVDDIL 119
           P+  W+   L H   ++  +   + +  D     RY         SW  ++   +VD+I+
Sbjct: 279 PYKNWQSRALQHPLLKDHLINRRSSYGRDKYHQARYHRNVASHKTSWKSKYKAEEVDEII 338


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,477,136
Number of Sequences: 37544
Number of extensions: 309542
Number of successful extensions: 914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)