Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D01
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = -3

Query: 403  KKIIGDFLVKLQTIKATGDFSAGEKLFNKYSSLDEPWGRWRDIVLMHKQPRNIFVQPNTF 224
            KK++ D   K+Q I    D    +KL   +S +DE +G     +L   Q R +      F
Sbjct: 1003 KKVVEDDKKKIQAIITDLDEEKKKKLKVAWSEVDENFGSIFSTLLPGTQARLVPPDGVDF 1062

Query: 223  HKG 215
             KG
Sbjct: 1063 MKG 1065


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 497  LQQTHDHETCAGVRLQPSL-SGGLVHFGRLSGSVPQQA 607
            +QQT      AG   QPSL +GG V F  L+     QA
Sbjct: 1368 VQQTAATSAAAGTGQQPSLTTGGAVPFKLLTKKSRDQA 1405


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,228
Number of Sequences: 2352
Number of extensions: 11457
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)