Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D01
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...   126   2e-29
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...   126   2e-29
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...   126   2e-29
AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical ...    29   4.8  
AC024214-11|AAF36073.2|  117|Caenorhabditis elegans Hypothetical...    28   6.4  

>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
            protein F02E9.9b protein.
          Length = 745

 Score =  126 bits (303), Expect = 2e-29
 Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
 Frame = -3

Query: 661  IFGYEGQEAEDVTYVNWLSLLWNGAAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXX 482
            IFGY G  A++V YVNWLS +  G   A E YQ   K W QAH  AR+V+ +        
Sbjct: 553  IFGYTGDLAQEVKYVNWLSEIRAGLL-ALEFYQAEQKKWGQAHCYARYVLTKVVLEAGQG 611

Query: 481  XXXXXXXE--PGK-NLLLTLQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYS 311
                   +   GK +L   L ++ + + G+  +  FL KLQ  K+TGDF  G++LF  Y 
Sbjct: 612  FVKIEETKGEDGKPDLHFKLDRNLIDSVGRPAVNTFLAKLQAYKSTGDFEGGKRLFESYG 671

Query: 310  SLDEPWGRWRDIVLMHKQPRNIFVQPNTFHKGDAVEXKRYPATAEGMVASWVDRFPNTKV 131
             + +    WRDI +  ++PR +FVQPNT  K   +    Y +   G++ S+V+R+  + V
Sbjct: 672  VVGDTELHWRDICIARRKPRRLFVQPNTVEKNGEISLVTYSSDVSGVIQSFVERYEKSAV 731

Query: 130  DDILEKLAKENSKYF 86
            +D L    K++ K+F
Sbjct: 732  ED-LYACWKDDQKWF 745


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical protein
            F02E9.9a protein.
          Length = 707

 Score =  126 bits (303), Expect = 2e-29
 Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
 Frame = -3

Query: 661  IFGYEGQEAEDVTYVNWLSLLWNGAAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXX 482
            IFGY G  A++V YVNWLS +  G   A E YQ   K W QAH  AR+V+ +        
Sbjct: 515  IFGYTGDLAQEVKYVNWLSEIRAGLL-ALEFYQAEQKKWGQAHCYARYVLTKVVLEAGQG 573

Query: 481  XXXXXXXE--PGK-NLLLTLQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYS 311
                   +   GK +L   L ++ + + G+  +  FL KLQ  K+TGDF  G++LF  Y 
Sbjct: 574  FVKIEETKGEDGKPDLHFKLDRNLIDSVGRPAVNTFLAKLQAYKSTGDFEGGKRLFESYG 633

Query: 310  SLDEPWGRWRDIVLMHKQPRNIFVQPNTFHKGDAVEXKRYPATAEGMVASWVDRFPNTKV 131
             + +    WRDI +  ++PR +FVQPNT  K   +    Y +   G++ S+V+R+  + V
Sbjct: 634  VVGDTELHWRDICIARRKPRRLFVQPNTVEKNGEISLVTYSSDVSGVIQSFVERYEKSAV 693

Query: 130  DDILEKLAKENSKYF 86
            +D L    K++ K+F
Sbjct: 694  ED-LYACWKDDQKWF 707


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical protein
            F02E9.9b protein.
          Length = 745

 Score =  126 bits (303), Expect = 2e-29
 Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
 Frame = -3

Query: 661  IFGYEGQEAEDVTYVNWLSLLWNGAAKATEMYQPSTKTWLQAHARARFVIMRXXXXXXXX 482
            IFGY G  A++V YVNWLS +  G   A E YQ   K W QAH  AR+V+ +        
Sbjct: 553  IFGYTGDLAQEVKYVNWLSEIRAGLL-ALEFYQAEQKKWGQAHCYARYVLTKVVLEAGQG 611

Query: 481  XXXXXXXE--PGK-NLLLTLQKDRLATDGKKIIGDFLVKLQTIKATGDFSAGEKLFNKYS 311
                   +   GK +L   L ++ + + G+  +  FL KLQ  K+TGDF  G++LF  Y 
Sbjct: 612  FVKIEETKGEDGKPDLHFKLDRNLIDSVGRPAVNTFLAKLQAYKSTGDFEGGKRLFESYG 671

Query: 310  SLDEPWGRWRDIVLMHKQPRNIFVQPNTFHKGDAVEXKRYPATAEGMVASWVDRFPNTKV 131
             + +    WRDI +  ++PR +FVQPNT  K   +    Y +   G++ S+V+R+  + V
Sbjct: 672  VVGDTELHWRDICIARRKPRRLFVQPNTVEKNGEISLVTYSSDVSGVIQSFVERYEKSAV 731

Query: 130  DDILEKLAKENSKYF 86
            +D L    K++ K+F
Sbjct: 732  ED-LYACWKDDQKWF 745


>AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical
           protein H34I24.2 protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 651 TKDKKPKTSHTLTGSACCGTEPLRRPKCTNPP 556
           T    P  +   TGS  C  + L RP CTN P
Sbjct: 263 TTTPNPCLAFNCTGSGPCQLDSLNRPYCTNCP 294


>AC024214-11|AAF36073.2|  117|Caenorhabditis elegans Hypothetical
           protein Y77E11A.3 protein.
          Length = 117

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 446 SPVDATKGSSRYRRQEDHWRFLGETSNDKGN 354
           S  ++ K   R+ R+E  W FLG+   + GN
Sbjct: 16  SEKNSEKAHKRFSREEHEWSFLGQQQFNAGN 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,677,119
Number of Sequences: 27780
Number of extensions: 252742
Number of successful extensions: 696
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)