Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C22
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 184 1e-47
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 182 6e-47
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 137 2e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 77 2e-15
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 77 2e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.007
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.089
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.16
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.27
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.36
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.36
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.48
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.63
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 29 0.83
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.83
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.83
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.5
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.9
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.5
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.4
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 4.4
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.4
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 4.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.9
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.9
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 26 5.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.9
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 5.9
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 5.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.9
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 7.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 7.8
SPAC13D6.03c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 26 7.8
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 7.8
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.8
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.8
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.8
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 184 bits (449), Expect = 1e-47
Identities = 96/179 (53%), Positives = 120/179 (67%)
Frame = -3
Query: 772 PXXSSQXFEG*XXYXPKDNNLXGKFEXTGXPTGRRVACLKLGSPXTWMPNGILNVSAXEK 593
P Q FEG KD NL GKFE +G P R ++ NGILNVSA EK
Sbjct: 434 PGVLIQVFEG-ERARTKDCNLLGKFELSGIPPAPR-GVPQIEVTFDVDANGILNVSALEK 491
Query: 592 STNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 413
T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S+++++
Sbjct: 492 GTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSL 551
Query: 412 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 236
+D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 552 DDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 182 bits (443), Expect = 6e-47
Identities = 95/179 (53%), Positives = 120/179 (67%)
Frame = -3
Query: 772 PXXSSQXFEG*XXYXPKDNNLXGKFEXTGXPTGRRVACLKLGSPXTWMPNGILNVSAXEK 593
P Q FEG KD NL GKFE +G P R ++ NGILNVSA EK
Sbjct: 434 PGVLIQVFEG-ERARTKDCNLLGKFELSGIPPAPR-GVPQIEVTFDVDANGILNVSALEK 491
Query: 592 STNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 413
T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S+++++
Sbjct: 492 GTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSL 551
Query: 412 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 236
+D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 552 DDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 137 bits (331), Expect = 2e-33
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Frame = -3
Query: 757 QXFEG*XXYXPKDNNLXGKFEXTGXPTGRRVACLKLGSPXTWMPNGILNVSAXEKS-TNK 581
Q +EG KDNNL GKF+ G P R ++ NG+L VSA +KS K
Sbjct: 468 QVYEG-ERTLTKDNNLLGKFDLRGIPPAPR-GVPQIEVTFEVDANGVLTVSAVDKSGKGK 525
Query: 580 EDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDE 404
+K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE
Sbjct: 526 PEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDE 585
Query: 403 KLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 239
+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 586 QLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 77.4 bits (182), Expect = 2e-15
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Frame = -3
Query: 724 KDNNLXGKFEXTGX-PTGRRVACLKLGSPXTWMPNGILNVSAXEKSTNKEDKITITNDKG 548
+DN L G F+ TG P + +++ +GI+NVSA +K+TNK+ IT+ G
Sbjct: 492 RDNKLIGNFQLTGIAPAPKGQPQIEVSFDVD--ADGIINVSARDKATNKDSSITVAGSSG 549
Query: 547 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSD 374
L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ +
Sbjct: 550 -LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDL 608
Query: 373 KQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 236
+ I D K ++ E+ + K E++ + + +Y+
Sbjct: 609 RSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 77.4 bits (182), Expect = 2e-15
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Frame = -3
Query: 721 DNNLXGKFEXTGXPTGRRVACLKLGSPXTWMPNGILNVSAXEKSTNKEDKITITNDKGRL 542
+N G+F+ TG P R +L + NGIL V+A EK+T + I ITN G L
Sbjct: 455 ENEPLGEFQLTGIPPMPRGQA-ELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHL 513
Query: 541 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 362
S +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + + K+ DK I
Sbjct: 514 SSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKI 573
Query: 361 ---LDKCNDTIKWLDSN 320
L +C ++ D+N
Sbjct: 574 EAQLAECMSQLELEDTN 590
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.9 bits (79), Expect = 0.007
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Frame = -3
Query: 595 KSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 419
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 418 TMED--EKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 254
++D + S + +L K D WL + + K Y K ++L + PI
Sbjct: 593 KLDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.089
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 535 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 356
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 355 K 353
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.16
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -3
Query: 553 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 374
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 373 KQTILDKCNDTIK 335
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 30.7 bits (66), Expect = 0.27
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -3
Query: 586 NKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 407
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 406 EKLKEKISD 380
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.36
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -3
Query: 553 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 377
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 376 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 278
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -3
Query: 541 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 362
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 361 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 272
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.48
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -3
Query: 616 LNVSAXEKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQAKNA 449
LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q +A
Sbjct: 63 LNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGLDA 120
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.63
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = -3
Query: 610 VSAXEKSTNKEDKITITNDKGRLSKEEIERMVNE-AEKYRNEDDKQKETIQAKNALESYC 434
V +K + K K + ++ +E E +EK ++ K + KNA ++
Sbjct: 71 VPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALA 130
Query: 433 FSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 278
M DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 131 DDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 29.1 bits (62), Expect = 0.83
Identities = 28/112 (25%), Positives = 48/112 (42%)
Frame = -3
Query: 607 SAXEKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 428
S+ +K K + T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 427 MKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 272
+ +E EK KEK D D++ DT+ D NQ+ +E E QKE++
Sbjct: 266 NSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.83
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = -3
Query: 565 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 386
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 385 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 281
D++++ D +K+ L + EY +QK
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.83
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 553 KGRLSKEEIERMVNEAEKYRNEDD 482
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 397 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 272
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -3
Query: 544 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQ 368
L+ + ++ + E E K+ ET++ KN+ + + ++ E LK +K
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKD 544
Query: 367 TILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIYNPII 251
++++ IK + N +L +EY +K K+ E YN ++
Sbjct: 545 RLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVM 586
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -3
Query: 535 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 359
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 358 DKCNDTIKWLDSNQLADKEEYEHKQK 281
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 616 LNVSAXEKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNED 485
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -3
Query: 547 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 371
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 370 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 263
+T + + K L +N+L+ E + E E Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDY 1044
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 559 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 383
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 382 DSDKQT 365
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -3
Query: 571 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 392
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 391 KISDSDKQTILDKCNDTIK 335
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 520 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 416
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 4.4
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = -3
Query: 586 NKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAL-ESYCFSMKSTME 410
+KED DK R KE+ E M ++ DD+ + IQ N+ E
Sbjct: 4033 SKEDDNKALEDKDRQEKEDEEEMSDDV----GIDDEIQPDIQENNSQPPPENEDHLDLPE 4088
Query: 409 DEKLKEKISDSDKQTILDKCNDTIKWLDSN-QLADKEEYEHKQ 284
D KL EK D K + L+ + ++ D N + AD E+ E Q
Sbjct: 4089 DLKLDEKEGDVSKDSDLEDMD--MEAADENKEEADAEKDEPMQ 4129
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -3
Query: 517 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 338
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 337 KWLDSNQLADKEEYEHKQKELEGIYNPI 254
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 490 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 329
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/113 (15%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = -3
Query: 613 NVSAXEKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYR-NEDDKQKETIQAKNALESY 437
+ ++ E ++D ++ + R S + + +++E + ++KQ + + N +
Sbjct: 12 DANSTEVDAAEQDAASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPND 71
Query: 436 CFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 278
K +E + ++++DK+ D + + D+N+ +++E + ++ E
Sbjct: 72 TTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDE 124
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -3
Query: 538 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 386
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 385 SDSDKQTILDKCND 344
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 535 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 365
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 610 VSAXEKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 449
V A KS ++++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 571 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 395
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 394 EKISDSDKQTILDKC 350
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -3
Query: 580 EDKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 410
+ ++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 228 EESPEVCRASRAEHPEPE 175
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/100 (19%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 580 EDKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMK 422
E+++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 421 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 302
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 541 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 419
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = -3
Query: 625 NGILNVSAXEK-STNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 449
NG + S K ST+ + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 448 LESYCFSMKSTMEDEKLKEKISDSD 374
S+ ++ +T++ + KI +S+
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNSN 458
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = -3
Query: 598 EKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 419
+K + D+ + ++ RL +EE +R++ E K R + DK++E + + LE +
Sbjct: 676 KKQQQEADREKMAREQ-RLREEEEKRILEE-RKRREKLDKEEEERRRRELLEKESEEKER 733
Query: 418 TMEDEKLKEKISDSDKQTILDKC 350
+ + K+ + + + D C
Sbjct: 734 RLREAKIAAFFAPNQTKEGSDGC 756
>SPAC13D6.03c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 228
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 684 IPVXSNLPXKLLSFGXYXXHPSNXWD 761
+ + SNL ++S G + HPSN +D
Sbjct: 74 VKIASNLGPMVISDGLHVPHPSNRFD 99
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 7.8
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -3
Query: 598 EKSTNKEDKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 419
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 418 TMEDEKLKEKISDSDK 371
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 553 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 443
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 487 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 311
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 310 DK 305
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 538 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 359
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 358 D 356
D
Sbjct: 451 D 451
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,683,222
Number of Sequences: 5004
Number of extensions: 49497
Number of successful extensions: 273
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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